RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 LINGO1Q96FE5 620 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 OR2A14Q96R47 310 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 KLHL25Q9H0H3 589 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 APMAPQ9HDC9 416 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 SPATA7Q9P0W8 599 aa24.53■■□□□ 1.52
TSPAN4-207ENST00000397411 ARHGEF33A8MVX0 844 aa24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 KLK10O43240 276 aa24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 ZNF500O60304 480 aaPredicted RBP24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 EBLN1P0CF75 366 aa24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 TSTA3Q13630 321 aaPredicted RBP24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 KBTBD12Q3ZCT8 623 aa24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 TRIM73Q86UV7 250 aa24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 D2HGDHQ8N465 521 aa24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 LMNTD1Q8N9Z9 388 aa24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 MCOLN3Q8TDD5 553 aa24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 OLFM1Q99784 485 aa24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 L2HGDHQ9H9P8 463 aa24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 SIDT1Q9NXL6 827 aaKnown RBP24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 RARRES3Q9UL19 164 aa24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 APC2O95996 2303 aa24.52■■□□□ 1.52
TSPAN4-207ENST00000397411 ZNF839A8K0R7 811 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 C8GP07360 202 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 PVRP15151 417 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 FOLR1P15328 257 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 ST6GAL1P15907 406 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 CYP2A7P20853 494 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 HSD17B2P37059 387 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 GP5P40197 560 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 TUBB3Q13509 450 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 SF1Q15637 639 aaKnown RBP24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 GRTP1Q5TC63 336 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 BROXQ5VW32 411 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 N4BP2L2Q92802 583 aaPredicted RBP24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 PMEPA1Q969W9 287 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 TSPAN17Q96FV3 270 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 TRAPPC9Q96Q05 1148 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 PKP4Q99569 1192 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 DPH1Q9BZG8 443 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 FANCEQ9HB96 536 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 SYTL2Q9HCH5 934 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 FGF21Q9NSA1 209 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 NFU1Q9UMS0 254 aa24.51■■□□□ 1.51
TSPAN4-207ENST00000397411 A0A0J9YY10 115 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 ESPNB1AK53 854 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 STMND1H3BQB6 276 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 GFYI3L273 518 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 HIST1H2AGP0C0S8 130 aaPredicted RBP24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 HIST1H2ADP20671 130 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 SPRP35270 261 aaPredicted RBP24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 PGGT1BP53609 377 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 NAB1Q13506 487 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 USP10Q14694 798 aaKnown RBP24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 SLC5A12Q1EHB4 618 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 TEX35Q5T0J7 233 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 BPHLQ86WA6 291 aaPredicted RBP24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 PPP1R3BQ86XI6 285 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 LINC01555Q8NAE3 123 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 HNRNPLLQ8WVV9 542 aaKnown RBP24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 MRRFQ96E11 262 aaKnown RBP24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 HIST1H2AHQ96KK5 128 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 HIST1H2AJQ99878 128 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 H2AFJQ9BTM1 129 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 TRIM54Q9BYV2 358 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 PITPNM3Q9BZ71 974 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 NINJ2Q9NZG7 142 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 MTO1Q9Y2Z2 717 aaKnown RBP24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 PCM1Q15154 2024 aa24.5■■□□□ 1.51
TSPAN4-207ENST00000397411 KRT87PA6NCN2 255 aa24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 MYO1CO00159 1063 aa24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 OAS2P29728 719 aaKnown RBP24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 TAS2R39P59534 338 aa24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 POU4F1Q01851 419 aa24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 SLMAPQ14BN4 828 aa24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 GPR19Q15760 415 aa24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 NKAPQ8N5F7 415 aaKnown RBP24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 FBXO15Q8NCQ5 510 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 TCTN2Q96GX1 697 aa24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 RBBP8Q99708 897 aa24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 MENTQ9BUN1 341 aa24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 INTS7Q9NVH2 962 aaKnown RBP24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 ACSL6Q9UKU0 697 aa24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 BTRCQ9Y297 605 aa24.49■■□□□ 1.51
TSPAN4-207ENST00000397411 SLC16A5O15375 505 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 LIPCP11150 499 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 PEBP1P30086 187 aaKnown RBP24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 PNLIPRP1P54315 467 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 ARHGAP19Q14CB8 494 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 CYP2A13Q16696 494 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 RELL1Q8IUW5 271 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 SYTL1Q8IYJ3 562 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 LRRN4CLQ8ND94 238 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 DENND1AQ8TEH3 1009 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 SMPDL3AQ92484 453 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 CYTH2Q99418 400 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 CDC42EP4Q9H3Q1 356 aaKnown RBP24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 PARVBQ9HBI1 364 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 ABCF3Q9NUQ8 709 aa24.48■■□□□ 1.51
TSPAN4-207ENST00000397411 ANKRD12Q6UB98 2062 aa24.47■■□□□ 1.51
TSPAN4-207ENST00000397411 A0A087WV48 116 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms