RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 HIDE1A8MVS5 230 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 B4GAT1O43505 415 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 WDR47O94967 919 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 RASAL1O95294 804 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 B3GALT4O96024 378 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 ZNF182P17025 639 aaPredicted RBP23.18■■□□□ 1.3
PABPN1-202ENST00000397276 FAM86B1Q8N7N1 296 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 FBXO30Q8TB52 745 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 SLC32A1Q9H598 525 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 TRIM43BA6NCK2 446 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 UMPSP11172 480 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 RELAQ04206 551 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 CCDC149Q6ZUS6 474 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 TRIM46Q7Z4K8 759 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 ANKRD46Q86W74 232 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 PACRGLQ8N7B6 248 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 TRIM43Q96BQ3 446 aaPredicted RBP23.18■■□□□ 1.3
PABPN1-202ENST00000397276 AURKBQ96GD4 344 aaPredicted RBP23.18■■□□□ 1.3
PABPN1-202ENST00000397276 OR52E6Q96RD3 313 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 SLC6A13Q9NSD5 602 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 TBC1D23Q9NUY8 699 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 TRPS1Q9UHF7 1281 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 DLGAP4Q9Y2H0 992 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 CORINQ9Y5Q5 1042 aa23.18■■□□□ 1.3
PABPN1-202ENST00000397276 GSTA4O15217 222 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 SNAP29O95721 258 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 GSNP06396 782 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 BCKDHAP12694 445 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 C21orf59P57076 290 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 ERVFC1P60507 584 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 PTCHD3Q3KNS1 767 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 SLC36A3Q495N2 470 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 DCDC5Q6ZRR9 648 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 OR2T12Q8NG77 320 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 COX4I2Q96KJ9 171 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 TSSK3Q96PN8 268 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 CHD7Q9P2D1 2997 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 MAGEL2Q9UJ55 1249 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 SLC22A14Q9Y267 594 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 COQ6Q9Y2Z9 468 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 HCFC2Q9Y5Z7 792 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 OR2AG2A6NM03 316 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 LRATO95237 230 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 HIST1H2AGP0C0S8 130 aaPredicted RBP23.17■■□□□ 1.3
PABPN1-202ENST00000397276 PABPC1P11940 636 aaKnown RBP23.17■■□□□ 1.3
PABPN1-202ENST00000397276 TYRP14679 529 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 PORP16435 677 aaPredicted RBP23.17■■□□□ 1.3
PABPN1-202ENST00000397276 HIST1H2ADP20671 130 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 AOAHP28039 575 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 POLR2IP36954 125 aaKnown RBP23.17■■□□□ 1.3
PABPN1-202ENST00000397276 ZIK1Q3SY52 487 aaPredicted RBP23.17■■□□□ 1.3
PABPN1-202ENST00000397276 KCTD8Q6ZWB6 473 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 SPRED1Q7Z699 444 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 HIST1H2AHQ96KK5 128 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 MCCC1Q96RQ3 725 aaPredicted RBP23.17■■□□□ 1.3
PABPN1-202ENST00000397276 HIST1H2AJQ99878 128 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 TCF25Q9BQ70 676 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 H2AFJQ9BTM1 129 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 C1orf109Q9NX04 203 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 SLC25A37Q9NYZ2 338 aa23.17■■□□□ 1.3
PABPN1-202ENST00000397276 FUOMA2VDF0 154 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 CLOCKO15516 846 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 GMNNO75496 209 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 ADH1AP07327 375 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 RXRGP48443 463 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 MAD2L1Q13257 205 aaPredicted RBP23.16■■□□□ 1.3
PABPN1-202ENST00000397276 LRRC26Q2I0M4 334 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 PLPP4Q5VZY2 271 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 Q6ZVL8 140 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 ZNF366Q8N895 744 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 UBTD2Q8WUN7 234 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 P2RY13Q9BPV8 354 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 ELOVL6Q9H5J4 265 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 CDH7Q9ULB5 785 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 SCN8AQ9UQD0 1980 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 ATP1B2P14415 290 aaPredicted RBP23.16■■□□□ 1.3
PABPN1-202ENST00000397276 RPS9P46781 194 aaKnown RBP23.16■■□□□ 1.3
PABPN1-202ENST00000397276 BMXP51813 675 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 CD300CQ08708 224 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 TMEM215Q68D42 235 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 NEK5Q6P3R8 708 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 GDPD4Q6W3E5 623 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 PAPD5Q8NDF8 572 aaKnown RBP23.16■■□□□ 1.3
PABPN1-202ENST00000397276 OR2A12Q8NGT7 310 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 ADAMTS16Q8TE57 1224 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 CARS2Q9HA77 564 aaKnown RBP23.16■■□□□ 1.3
PABPN1-202ENST00000397276 PARVBQ9HBI1 364 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 PAIP2BQ9ULR5 123 aaKnown RBP23.16■■□□□ 1.3
PABPN1-202ENST00000397276 FADS3Q9Y5Q0 445 aa23.16■■□□□ 1.3
PABPN1-202ENST00000397276 UPK3BL1B0FP48 263 aa23.15■■□□□ 1.3
PABPN1-202ENST00000397276 UPK3BL2E5RIL1 263 aa23.15■■□□□ 1.3
PABPN1-202ENST00000397276 KRT6AP02538 564 aa23.15■■□□□ 1.3
PABPN1-202ENST00000397276 KRT6BP04259 564 aa23.15■■□□□ 1.3
PABPN1-202ENST00000397276 ANXA6P08133 673 aa23.15■■□□□ 1.3
PABPN1-202ENST00000397276 OCM2P0CE71 109 aa23.15■■□□□ 1.3
PABPN1-202ENST00000397276 OCMP0CE72 109 aaPredicted RBP23.15■■□□□ 1.3
PABPN1-202ENST00000397276 KRT6CP48668 564 aa23.15■■□□□ 1.3
PABPN1-202ENST00000397276 ENPP6Q6UWR7 440 aa23.15■■□□□ 1.3
PABPN1-202ENST00000397276 GCNT7Q6ZNI0 430 aa23.15■■□□□ 1.3
PABPN1-202ENST00000397276 ZC3H7AQ8IWR0 971 aaKnown RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms