RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 BCKDHAP12694 445 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 JUPP14923 745 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 MAPK1P28482 360 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 OPRD1P41143 372 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 GPR1P46091 355 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 CHIT1Q13231 466 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 GTF2H3Q13889 308 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 FAM174BQ3ZCQ3 159 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 AASDHQ4L235 1098 aaPredicted RBP14.55□□□□□ -0.08
CBX3-202ENST00000396386 TANGO2Q6ICL3 276 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 SUSD1Q6UWL2 747 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 DLEU7Q6UYE1 221 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 ERN2Q76MJ5 926 aaKnown RBP14.55□□□□□ -0.08
CBX3-202ENST00000396386 NLRP8Q86W28 1048 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 THOC6Q86W42 341 aaKnown RBP14.55□□□□□ -0.08
CBX3-202ENST00000396386 IFNEQ86WN2 208 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 SPPL2CQ8IUH8 684 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 KLHDC8AQ8IYD2 350 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 FAM9CQ8IZT9 166 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 LILRA3Q8N6C8 439 aaPredicted RBP14.55□□□□□ -0.08
CBX3-202ENST00000396386 EME1Q96AY2 570 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 CMTM7Q96FZ5 175 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 CGREF1Q99674 301 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 CLMPQ9H6B4 373 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 CCM2LQ9NUG4 571 aaPredicted RBP14.55□□□□□ -0.08
CBX3-202ENST00000396386 DLGAP2Q9P1A6 1054 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 STOX2Q9P2F5 926 aaPredicted RBP14.55□□□□□ -0.08
CBX3-202ENST00000396386 RAB26Q9ULW5 256 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 SERTM1A2A2V5 107 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 TBC1D3BA6NDS4 549 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 NPIPB8E9PQR5 432 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 MMP20O60882 483 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 RNASEH1O60930 286 aaKnown RBP14.55□□□□□ -0.08
CBX3-202ENST00000396386 IL6P05231 212 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 GPIP06744 558 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 PRPS2P11908 318 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 HTR1EP28566 365 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 IL12RB1P42701 662 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 CCR3P51677 355 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 RPS14P62263 151 aaKnown RBP14.55□□□□□ -0.08
CBX3-202ENST00000396386 IRF8Q02556 426 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 FOLH1Q04609 750 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 RUNX3Q13761 415 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 TBCELQ5QJ74 424 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 LIPJQ5W064 366 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 FRG2Q64ET8 278 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 NAIF1Q69YI7 327 aaPredicted RBP14.55□□□□□ -0.08
CBX3-202ENST00000396386 AGTRAPQ6RW13 159 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 ERMP1Q7Z2K6 904 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 TRIM74Q86UV6 250 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 YAF2Q8IY57 180 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 CXorf40AQ8TE69 158 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 CANT1Q8WVQ1 401 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 PPM1MQ96MI6 270 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 FRG2BQ96QU4 278 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 CDH7Q9ULB5 785 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 TMED5Q9Y3A6 229 aa14.55□□□□□ -0.08
CBX3-202ENST00000396386 H3BM21 787 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 K7ESM1 405 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 AKAP10O43572 662 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 PRAMEF4O60810 478 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 TIPRLO75663 272 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 PCSK2P16519 638 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 ZNF33BQ06732 778 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 DPTQ07507 201 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 FCHO2Q0JRZ9 810 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 CSTF3Q12996 717 aaKnown RBP14.54□□□□□ -0.08
CBX3-202ENST00000396386 FXNQ16595 210 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 AAK1Q2M2I8 961 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 ZNF658BQ4V348 819 aaPredicted RBP14.54□□□□□ -0.08
CBX3-202ENST00000396386 MTX3Q5HYI7 312 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 SPANXN4Q5MJ08 99 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 PRAMEF9Q5VWM5 478 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 PPP2R2DQ66LE6 453 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 TRAPPC5Q8IUR0 188 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 MMAAQ8IVH4 418 aaKnown RBP14.54□□□□□ -0.08
CBX3-202ENST00000396386 APLFQ8IW19 511 aaPredicted RBP14.54□□□□□ -0.08
CBX3-202ENST00000396386 OR8J3Q8NGG0 315 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 PPWD1Q96BP3 646 aaKnown RBP14.54□□□□□ -0.08
CBX3-202ENST00000396386 MED8Q96G25 268 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 OR2AG1Q9H205 316 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 SEMA6AQ9H2E6 1030 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 NKX2-4Q9H2Z4 354 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 IGFLR1Q9H665 355 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 MAGEL2Q9UJ55 1249 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 AURKCQ9UQB9 309 aa14.54□□□□□ -0.08
CBX3-202ENST00000396386 CLGNO14967 610 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 HNRNPRO43390 633 aaKnown RBP14.53□□□□□ -0.08
CBX3-202ENST00000396386 EPHX1P07099 455 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 MTHFD1P11586 935 aaKnown RBP14.53□□□□□ -0.08
CBX3-202ENST00000396386 ACPPP15309 386 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 IL10P22301 178 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 GJA4P35212 333 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 NEK2P51955 445 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 GRM2Q14416 872 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 PDK3Q15120 406 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 XKR6Q5GH73 641 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 HMBOX1Q6NT76 420 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 PROSER1Q86XN7 944 aa14.53□□□□□ -0.08
CBX3-202ENST00000396386 ADGRG5Q8IZF4 528 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms