RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 YBX1P67809 324 aaKnown RBP13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 IFI35P80217 286 aaPredicted RBP13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 SLC25A11Q02978 314 aaKnown RBP13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 TYRO3Q06418 890 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 SLC10A2Q12908 348 aaPredicted RBP13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 BOP1Q14137 746 aaKnown RBP13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 ZNF766Q5HY98 468 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 CFAP206Q8IYR0 622 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 DTWD1Q8N5C7 304 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 MDS2Q8NDY4 140 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 SCMH1Q96GD3 660 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 RBM41Q96IZ5 413 aaKnown RBP13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 FERD3LQ96RJ6 166 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 SRPK1Q96SB4 655 aaKnown RBP13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 CRB3Q9BUF7 120 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 TSPAN10Q9H1Z9 355 aaPredicted RBP13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 MVB12BQ9H7P6 319 aa13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 SEPT11Q9NVA2 429 aaKnown RBP13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 LUC7L2Q9Y383 392 aaKnown RBP13.05□□□□□ -0.32
VCPKMT-201ENST00000395859 IGHV1-45A0A0A0MS14 117 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 NPIPA5E9PKD4 350 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 MED26O95402 600 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 DNASE1P24855 282 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 PEBP1P30086 187 aaKnown RBP13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 OR1D4P47884 311 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 CD151P48509 253 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 HSF1Q00613 529 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 DSG2Q14126 1118 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 KRT33BQ14525 404 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 YOD1Q5VVQ6 348 aaPredicted RBP13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 ZDHHC20Q5W0Z9 365 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 FAM151BQ6UXP7 276 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 UNC5AQ6ZN44 842 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 DET1Q7L5Y6 550 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 NLRP9Q7RTR0 991 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 GAS2L3Q86XJ1 694 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 PHC3Q8NDX5 983 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 SUN3Q8TAQ9 357 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 STT3BQ8TCJ2 826 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 HM13Q8TCT9 377 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 DENND1AQ8TEH3 1009 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 ASB5Q8WWX0 329 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 SAMSN1Q9NSI8 373 aaKnown RBP13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 CUTCQ9NTM9 273 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 FAM8A1Q9UBU6 413 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 NPIPA1Q9UND3 350 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 RNF6Q9Y252 685 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 L3MBTL1Q9Y468 752 aa13.04□□□□□ -0.32
VCPKMT-201ENST00000395859 GLYATL1P3A0A0U1RQE8 302 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 FITM1A5D6W6 292 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 KCNK1O00180 336 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 KLK8O60259 260 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 NDST3O95803 873 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 MLYCDO95822 493 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 TSPAN12O95859 305 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 LY6G6DO95868 133 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 CHRM5P08912 532 aaPredicted RBP13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 ZGLP1P0C6A0 271 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 ABOP16442 354 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 MCM3P25205 808 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 CHRNB4P30926 498 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 PRLHRP49683 370 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 FANCCQ00597 558 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 ALDH6A1Q02252 535 aaKnown RBP13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 GBE1Q04446 702 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 ITGA9Q13797 1035 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 SYCP1Q15431 976 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 TCP11X2Q5H9J9 407 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 CAMKMTQ7Z624 323 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 LAPTM4BQ86VI4 370 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 GHDCQ8N2G8 530 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 HES7Q9BYE0 225 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 COG4Q9H9E3 785 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 CBX8Q9HC52 389 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 SLC24A3Q9HC58 644 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 IL1RAPL1Q9NZN1 696 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 C3orf18Q9UK00 162 aa13.03□□□□□ -0.32
VCPKMT-201ENST00000395859 LOC102723996A0A087X1L8 192 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 AGAP14A8MT82 685 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 FAM227AF5H4B4 570 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 PES1O00541 588 aaKnown RBP13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 WFS1O76024 890 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 MYBL2P10244 700 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 MSH3P20585 1137 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 PDHA2P29803 388 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 ADSLP30566 484 aaPredicted RBP13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 DLX5P56178 289 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 PPIDQ08752 370 aaKnown RBP13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 MYBPHQ13203 477 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 PRKG2Q13237 762 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 DPYSL3Q14195 570 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 PPP2R5EQ16537 467 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 RNFT1Q5M7Z0 435 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 PPP1R2P3Q6NXS1 205 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 NT5DC3Q86UY8 548 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 MCATQ8IVS2 390 aaKnown RBP13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 EID3Q8N140 333 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 PQLC3Q8N755 202 aa13.02□□□□□ -0.33
VCPKMT-201ENST00000395859 FAF2Q96CS3 445 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms