RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 FKBP10Q96AY3 582 aa20.29■□□□□ 0.84
TRAF4-203ENST00000394925 A0A1B0GX78 115 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 SLC5A10A0PJK1 596 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 PJA2O43164 708 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 KDM1AO60341 852 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 ZG16O60844 167 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 PIM1P11309 404 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-203ENST00000394925 EDN3P14138 238 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 PRF1P14222 555 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 GCGRP47871 477 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 ARSFP54793 590 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 CSE1LP55060 971 aaKnown RBP20.28■□□□□ 0.84
TRAF4-203ENST00000394925 ZNF169Q14929 603 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-203ENST00000394925 NKG7Q16617 165 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 C11orf63Q6NUN7 778 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 KIRREL2Q6UWL6 708 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 SHISA6Q6ZSJ9 500 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 COG1Q8WTW3 980 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 STYXQ8WUJ0 223 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.28■□□□□ 0.84
TRAF4-203ENST00000394925 ALS2CR12Q96Q35 445 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 OSBPL8Q9BZF1 889 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 PIH1D1Q9NWS0 290 aaKnown RBP20.28■□□□□ 0.84
TRAF4-203ENST00000394925 HS3ST3B1Q9Y662 390 aa20.28■□□□□ 0.84
TRAF4-203ENST00000394925 OTOGQ6ZRI0 2925 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 OR51F1A6NGY5 319 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 QSOX1O00391 747 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 ALBP02768 609 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 ITIH4Q14624 930 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 KCTD11Q693B1 232 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 SP5Q6BEB4 398 aaPredicted RBP20.27■□□□□ 0.84
TRAF4-203ENST00000394925 CNGA4Q8IV77 575 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 KLHDC8BQ8IXV7 354 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 C2orf73Q8N5S3 287 aaPredicted RBP20.27■□□□□ 0.84
TRAF4-203ENST00000394925 LMNTD1Q8N9Z9 388 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 SPSB2Q99619 263 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 LHPPQ9H008 270 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 SOX17Q9H6I2 414 aaPredicted RBP20.27■□□□□ 0.84
TRAF4-203ENST00000394925 EPS8L2Q9H6S3 715 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 WDR54Q9H977 334 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 IMPACTQ9P2X3 320 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 ENTPD4Q9Y227 616 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 EFR3BQ9Y2G0 817 aa20.27■□□□□ 0.84
TRAF4-203ENST00000394925 MYO7BQ6PIF6 2116 aa20.26■□□□□ 0.83
TRAF4-203ENST00000394925 AKR1B15C9JRZ8 316 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-203ENST00000394925 MCM3P25205 808 aa20.26■□□□□ 0.83
TRAF4-203ENST00000394925 MSNP26038 577 aaKnown RBP20.26■□□□□ 0.83
TRAF4-203ENST00000394925 ELAVL4P26378 380 aaKnown RBP20.26■□□□□ 0.83
TRAF4-203ENST00000394925 PKLRP30613 574 aa20.26■□□□□ 0.83
TRAF4-203ENST00000394925 CTNNA1P35221 906 aaKnown RBP20.26■□□□□ 0.83
TRAF4-203ENST00000394925 GRIA3P42263 894 aa20.26■□□□□ 0.83
TRAF4-203ENST00000394925 PLOD1Q02809 727 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-203ENST00000394925 NAA30Q147X3 362 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-203ENST00000394925 TLR1Q15399 786 aa20.26■□□□□ 0.83
TRAF4-203ENST00000394925 TUBB8Q3ZCM7 444 aa20.26■□□□□ 0.83
TRAF4-203ENST00000394925 B3GNTL1Q67FW5 361 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-203ENST00000394925 PACS1Q6VY07 963 aa20.26■□□□□ 0.83
TRAF4-203ENST00000394925 COX15Q7KZN9 410 aa20.26■□□□□ 0.83
TRAF4-203ENST00000394925 DENND1AQ8TEH3 1009 aa20.26■□□□□ 0.83
TRAF4-203ENST00000394925 THOC3Q96J01 351 aaKnown RBP20.26■□□□□ 0.83
TRAF4-203ENST00000394925 UNKQ9C0B0 810 aaKnown RBP20.26■□□□□ 0.83
TRAF4-203ENST00000394925 MRM3Q9HC36 420 aaKnown RBP20.26■□□□□ 0.83
TRAF4-203ENST00000394925 CUTCQ9NTM9 273 aa20.26■□□□□ 0.83
TRAF4-203ENST00000394925 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.26■□□□□ 0.83
TRAF4-203ENST00000394925 CIDEBQ9UHD4 219 aa20.26■□□□□ 0.83
TRAF4-203ENST00000394925 PCDHA3Q9Y5H8 950 aa20.26■□□□□ 0.83
TRAF4-203ENST00000394925 ANKRD17O75179 2603 aaKnown RBP20.25■□□□□ 0.83
TRAF4-203ENST00000394925 DSCR3O14972 297 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 ONECUT2O95948 504 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 OR56A5P0C7T3 313 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 RAB28P51157 221 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 RBBP7Q16576 425 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 PARP6Q2NL67 630 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 AADACL2Q6P093 401 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 LINC00696Q6ZRV3 163 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 ARHGEF18Q6ZSZ5 1173 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 TAX1BP1Q86VP1 789 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 FJX1Q86VR8 437 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 METTL27Q8N6F8 245 aaPredicted RBP20.25■□□□□ 0.83
TRAF4-203ENST00000394925 LINC01555Q8NAE3 123 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 PHF12Q96QT6 1004 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 SLC26A1Q9H2B4 701 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 CTSFQ9UBX1 484 aa20.25■□□□□ 0.83
TRAF4-203ENST00000394925 POLQO75417 2590 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 PRSS44E7EML9 344 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 OR1I1O60431 355 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 METTL18O95568 372 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 FOXN2P32314 431 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 PTPN7P35236 360 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 OR1D4P47884 311 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 Q0VFX4 171 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 DNAJC21Q5F1R6 531 aaKnown RBP20.24■□□□□ 0.83
TRAF4-203ENST00000394925 FAM180AQ6UWF9 173 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 ISLR2Q6UXK2 745 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 CATSPER1Q8NEC5 780 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 OR11G2Q8NGC1 345 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 CFAP61Q8NHU2 1237 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 MOCOSQ96EN8 888 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 IL17FQ96PD4 163 aa20.24■□□□□ 0.83
TRAF4-203ENST00000394925 LRRC40Q9H9A6 602 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms