RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 SMPD4Q9NXE4 827 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 ZNF624Q9P2J8 865 aaPredicted RBP8.43□□□□□ -1.06
GABRA1-202ENST00000393943 DNMT3LQ9UJW3 386 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 OGDHLQ9ULD0 1010 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 USP3Q9Y6I4 520 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 SLC16A6O15403 523 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 SNX4O95219 450 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 MMP3P08254 477 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 RPS17P08708 135 aaKnown RBP8.43□□□□□ -1.06
GABRA1-202ENST00000393943 ATP5C1P36542 298 aaKnown RBP8.43□□□□□ -1.06
GABRA1-202ENST00000393943 ZNF33BQ06732 778 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 TUSC3Q13454 348 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 VGLL4Q14135 290 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 TBCEQ15813 527 aaPredicted RBP8.43□□□□□ -1.06
GABRA1-202ENST00000393943 SLC14A2Q15849 920 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 SLC39A12Q504Y0 691 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 SPOUT1Q5T280 376 aaKnown RBP8.43□□□□□ -1.06
GABRA1-202ENST00000393943 TMEM236Q5W0B7 351 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 USP45Q70EL2 814 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 EPHX4Q8IUS5 362 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 CPNE9Q8IYJ1 553 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 BPIFB1Q8TDL5 484 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 ZFP90Q8TF47 636 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 TMEM159Q96B96 161 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 C2orf49Q9BVC5 232 aaPredicted RBP8.43□□□□□ -1.06
GABRA1-202ENST00000393943 GALPQ9UBC7 116 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 SFMBT1Q9UHJ3 866 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 CMAHPQ9Y471 501 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 PCDHGB6Q9Y5F9 930 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 PCDHGA8Q9Y5G5 932 aa8.43□□□□□ -1.06
GABRA1-202ENST00000393943 A0A1W2PQ67 120 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 PIPSLA2A3N6 862 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 TRIM64CA6NLI5 447 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 CLIC1O00299 241 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 MSI1O43347 362 aaKnown RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 CTPS1P17812 591 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 RPS5P46782 204 aaKnown RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 HSPA7P48741 367 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 CDH4P55283 916 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 MRPS6P82932 125 aaKnown RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 FOXD4Q12950 439 aaPredicted RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 DGKZQ13574 1117 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 TRNP1Q6NT89 227 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 GEMIN6Q8WXD5 167 aaKnown RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 KCTD7Q96MP8 289 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 TMEM246Q9BRR3 403 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 KCNN2Q9H2S1 579 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 FAM105AQ9NUU6 356 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 ST3GAL5Q9UNP4 418 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 GSAPA4D1B5 854 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 OR6C75A6NL08 312 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 hCG_2039718K7EN88 272 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 CASKO14936 926 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 HOXA2O43364 376 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 XPNPEP2O43895 674 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 MAFKO60675 156 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 MAGP20916 626 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 GMPRP36959 345 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 CAMK2GQ13555 558 aaPredicted RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 SPCS2Q15005 226 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 TBRG1Q3YBR2 411 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 ANKDD1AQ495B1 522 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 GPR33Q49SQ1 333 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 PRAMEF18Q5VWM3 479 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 BHLHB9Q6PI77 547 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 GOLGA7Q7Z5G4 137 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 CACTIN-AS1Q8N1I8 211 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 DTWD1Q8N5C7 304 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 ZNF557Q8N988 423 aaPredicted RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 ZNF566Q969W8 418 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 SH3KBP1Q96B97 665 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 CMTM7Q96FZ5 175 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 ZCCHC2Q9C0B9 1178 aaKnown RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 SOX17Q9H6I2 414 aaPredicted RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 TRPV5Q9NQA5 729 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 INTS7Q9NVH2 962 aaKnown RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 MBD2Q9UBB5 411 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 MN1Q10571 1320 aaPredicted RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 SCN4AP35499 1836 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 PTPN2P17706 415 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 DPP6P42658 865 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 DGKQP52824 942 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 AP1S1P61966 158 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 POLR2LP62875 67 aaKnown RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 NRG1Q02297 640 aaPredicted RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 NPRL3Q12980 569 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 PON2Q15165 354 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 NDUFA9Q16795 377 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 EML3Q32P44 896 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 RAB6CQ53S08 254 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 C10orf62Q5T681 223 aaPredicted RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 CES5AQ6NT32 575 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 GPR153Q6NV75 609 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 ZNF467Q7Z7K2 595 aaPredicted RBP8.42□□□□□ -1.06
GABRA1-202ENST00000393943 PIM3Q86V86 326 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 RASAL3Q86YV0 1011 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 HS6ST3Q8IZP7 471 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 OR4F6Q8NGB9 312 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 CNIH3Q8TBE1 160 aa8.42□□□□□ -1.06
GABRA1-202ENST00000393943 FATE1Q969F0 183 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms