RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 SULT1C3Q6IMI6 304 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 YTHDF3Q7Z739 585 aaKnown RBP13.21□□□□□ -0.29
PTN-202ENST00000393083 ZNF547Q8IVP9 402 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 KIRREL3Q8IZU9 778 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 FITM2Q8N6M3 262 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 TRPC4APQ8TEL6 797 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 ESAMQ96AP7 390 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 LINC00615Q96LM1 132 aaPredicted RBP13.21□□□□□ -0.29
PTN-202ENST00000393083 RILPQ96NA2 401 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 LRRC37BQ96QE4 947 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 MYLK2Q9H1R3 596 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 SPASTQ9UBP0 616 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 VTI1BQ9UEU0 232 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 ZFP69BQ9UJL9 534 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 SUFUQ9UMX1 484 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 GPR34Q9UPC5 381 aa13.21□□□□□ -0.29
PTN-202ENST00000393083 PCYT1BQ9Y5K3 369 aaPredicted RBP13.21□□□□□ -0.29
PTN-202ENST00000393083 DCDC2BA2VCK2 349 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 MATN2O00339 956 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 TRIM38O00635 465 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 UBFD1O14562 309 aaKnown RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 LIN7AO14910 233 aaPredicted RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 SLC16A5O15375 505 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 HDAC3O15379 428 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 GRID2O43424 1007 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 UBOX5O94941 541 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 CELA2BP08218 269 aaPredicted RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 LCP2Q13094 533 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 PUM1Q14671 1186 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTN-202ENST00000393083 PCBP2Q15366 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTN-202ENST00000393083 PDCD2Q16342 344 aaPredicted RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 RBBP7Q16576 425 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 C18orf21Q32NC0 220 aaPredicted RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 ZNF658BQ4V348 819 aaPredicted RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 MBOAT1Q6ZNC8 495 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 MTDHQ86UE4 582 aaKnown RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 LRRTM4Q86VH4 590 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 SLC22A15Q8IZD6 547 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 DEFB124Q8NES8 71 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 HM13Q8TCT9 377 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 MAPK15Q8TD08 544 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 LMX1AQ8TE12 382 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 RHBDD1Q8TEB9 315 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 SETD7Q8WTS6 366 aaKnown RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 UBTD2Q8WUN7 234 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 ASB11Q8WXH4 323 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 FAR2Q96K12 515 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 SLC12A9Q9BXP2 914 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 TRIM54Q9BYV2 358 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 TMEM168Q9H0V1 697 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 CARS2Q9HA77 564 aaKnown RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 PARVBQ9HBI1 364 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 TNFRSF12AQ9NP84 129 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 MID1IP1Q9NPA3 183 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 SEMA4BQ9NPR2 832 aaPredicted RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 PDE10AQ9Y233 779 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 APOBEC2Q9Y235 224 aaKnown RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 ASB1Q9Y576 335 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 TNPO3Q9Y5L0 923 aaKnown RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 ST14Q9Y5Y6 855 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 ARID1BQ8NFD5 2236 aaPredicted RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 TDRD6O60522 2096 aaKnown RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 LMO7DNF2Z398 122 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 E2F3O00716 465 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 CHUKO15111 745 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 TAPBPO15533 448 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 SKAP2O75563 359 aaPredicted RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 POP7O75817 140 aaKnown RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 ANXA5P08758 320 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 ID4P47928 161 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 HSPA7P48741 367 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 RPIAP49247 311 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 CDKL1Q00532 357 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 SLC9B1Q4ZJI4 515 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 PYCR3Q53H96 274 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 EPGNQ6UW88 154 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 CFAP206Q8IYR0 622 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 EID2Q8N6I1 236 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 GBP7Q8N8V2 638 aaPredicted RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 OR2L2Q8NH16 312 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 OR4C6Q8NH72 309 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 CFAP61Q8NHU2 1237 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 AGAP11Q8TF27 550 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 RHBDF1Q96CC6 855 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 PPP1R36Q96LQ0 422 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 TMEM79Q9BSE2 394 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 HGH1Q9BTY7 390 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 NUF2Q9BZD4 464 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 TRNAU1APQ9NX07 287 aaKnown RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 ARL15Q9NXU5 204 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 GULP1Q9UBP9 304 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 MOSPD1Q9UJG1 213 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 PTBP2Q9UKA9 531 aaKnown RBP13.2□□□□□ -0.3
PTN-202ENST00000393083 PRKAB1Q9Y478 270 aa13.2□□□□□ -0.3
PTN-202ENST00000393083 C17orf113A0A1B0GUU1 675 aa13.19□□□□□ -0.3
PTN-202ENST00000393083 MGAT4DA6NG13 374 aa13.19□□□□□ -0.3
PTN-202ENST00000393083 TRPC5OSA6NMA1 111 aa13.19□□□□□ -0.3
PTN-202ENST00000393083 GPR89AB7ZAQ6 455 aa13.19□□□□□ -0.3
PTN-202ENST00000393083 GFYI3L273 518 aa13.19□□□□□ -0.3
PTN-202ENST00000393083 FCHO1O14526 889 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms