RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 FKBP9P1Q75LS8 142 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 RNF44Q7L0R7 432 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 DET1Q7L5Y6 550 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TAOK1Q7L7X3 1001 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 RASGRP2Q7LDG7 609 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 KRT27Q7Z3Y8 459 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PXKQ7Z7A4 578 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 KIAA1328Q86T90 577 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 LDB1Q86U70 411 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SESTD1Q86VW0 696 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM200AQ86VY9 491 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 VSIG1Q86XK7 387 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 MEX3DQ86XN8 651 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF677Q86XU0 584 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 MAP7D3Q8IWC1 876 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 LAX1Q8IWV1 398 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 GPALPP1Q8IXQ4 340 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 RAVER1Q8IY67 606 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM186BQ8IYM0 893 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM71AQ8IYT1 594 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 KIRREL3Q8IZU9 778 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CPXM2Q8N436 756 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 DNAJC22Q8N4W6 341 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ZCCHC9Q8N567 271 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC5A8Q8N695 610 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ENDOVQ8N8Q3 282 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 DCAF4L2Q8NA75 395 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 AVL9Q8NBF6 648 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM104Q8NE00 496 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 AGBL3Q8NEM8 1001 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 KBTBD8Q8NFY9 601 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 OR10G2Q8NGC3 310 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 OR4N2Q8NGD1 307 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 OR52B6Q8NGF0 335 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 OR5T2Q8NGG2 359 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 OR13F1Q8NGS4 319 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 OR6B3Q8NGW1 331 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PLBD2Q8NHP8 589 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 C9orf43Q8TAL5 461 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 THAP6Q8TBB0 222 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 KLF14Q8TD94 323 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CSGALNACT1Q8TDX6 532 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PPP4R1Q8TF05 950 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 GDPD5Q8WTR4 605 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ABHD5Q8WTS1 349 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 LMBR1Q8WVP7 490 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CACNG8Q8WXS5 425 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 DNAAF4Q8WXU2 420 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 STARD8Q92502 1023 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 MRPS27Q92552 414 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ERGIC1Q969X5 290 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 VPS33AQ96AX1 596 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SH3KBP1Q96B97 665 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 C18orf8Q96DM3 657 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ZBED6CLQ96FA7 236 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 OXNAD1Q96HP4 312 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 OR10C1Q96KK4 312 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM210BQ96KR6 192 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM227BQ96M60 508 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 GUCD1Q96NT3 240 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF607Q96SK3 696 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 YME1L1Q96TA2 773 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PCYT2Q99447 389 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 EYA3Q99504 573 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 DNAJC7Q99615 494 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PITX2Q99697 317 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 KIR2DL4Q99706 377 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SMAD5Q99717 465 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 NKX3-1Q99801 234 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SH3GL2Q99962 352 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 EIF2AK1Q9BQI3 630 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ST6GALNAC5Q9BVH7 336 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 KATNAL1Q9BW62 490 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM120AQ9BXJ8 343 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CADM1Q9BY67 442 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 NMUR2Q9GZQ4 415 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 LHX5Q9H2C1 402 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC25A32Q9H2D1 315 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 LRMDAQ9H2I8 198 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CUEDC2Q9H467 287 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 MOB1AQ9H8S9 216 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PNPLA8Q9NP80 782 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 A1CFQ9NQ94 594 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 NIT2Q9NQR4 276 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 GDF3Q9NR23 364 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 MAN2C1Q9NTJ4 1040 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TCP11L1Q9NUJ3 509 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 TYW1Q9NV66 732 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PNPOQ9NVS9 261 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 CISD1Q9NZ45 108 aaKnown RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 GRHL1Q9NZI5 618 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 OR6C2Q9NZP2 312 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 DHRS4-AS1Q9P1J3 65 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 ARMCX1Q9P291 453 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 IFT80Q9P2H3 777 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 WRAP73Q9P2S5 460 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 NLKQ9UBE8 527 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 MAGEC2Q9UBF1 373 aaPredicted RBP-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 PFDN2Q9UHV9 154 aa-0.4□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC25A13Q9UJS0 675 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms