RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 DCUN1D5Q9BTE7 237 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PBDC1Q9BVG4 233 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ROGDIQ9GZN7 287 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ELOVL4Q9GZR5 314 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ATP13A3Q9H7F0 1226 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 AGPAT4Q9NRZ5 378 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 XPR1Q9UBH6 696 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 NDRG3Q9UGV2 375 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 COQ4Q9Y3A0 265 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SNX8Q9Y5X2 465 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 GREB1LQ9C091 1923 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 TYROBPO43914 113 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 GLP2RO95838 553 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 DGKAP23743 735 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SOX10P56693 466 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CRYZQ08257 329 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 FAM110CQ1W6H9 321 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SLC39A12Q504Y0 691 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 STEAP4Q687X5 459 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 AWAT2Q6E213 333 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CARM1Q86X55 608 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 GID4Q8IVV7 300 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SCML4Q8N228 414 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 OR2T12Q8NG77 320 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 LENG9Q96B70 501 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 MTERF1Q99551 399 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 BCL2L14Q9BZR8 327 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 QRSL1Q9H0R6 528 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF112Q9UJU3 913 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 GTF2A1LQ9UNN4 478 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 NPIPA7E9PJI5 369 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 NR5A2O00482 541 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 AZIN1O14977 448 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 DCXO43602 365 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 NPIPA8P0DM63 369 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 BMP6P22004 513 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CPN2P22792 545 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 LEPRP48357 1165 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PPP3CAQ08209 521 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SLC1A5Q15758 541 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SPRYD7Q5W111 196 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ATG9BQ674R7 924 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 GPAT2Q6NUI2 795 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 DENND5BQ6ZUT9 1274 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 RHOUQ7L0Q8 258 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CHST15Q7LFX5 561 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF614Q8N883 585 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 LFNGQ8NES3 379 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF641Q96N77 438 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PHF12Q96QT6 1004 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 FAM129BQ96TA1 746 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 FEM1AQ9BSK4 669 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 IRF2BPLQ9H1B7 796 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SCN2AQ99250 2005 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ASCC3Q8N3C0 2202 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PP2D1A8MPX8 630 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SMIM22K7EJ46 135 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 HS6ST1O60243 411 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ARL6IP5O75915 188 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PIGRP01833 764 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 KITP10721 976 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 DDX6P26196 483 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 C19orf57Q0VDD7 668 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 LAMTOR4Q0VGL1 99 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 KIAA1614Q5VZ46 1190 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 TSPYL5Q86VY4 417 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 HID1Q8IV36 788 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PSD4Q8NDX1 1056 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 TRPV3Q8NET8 790 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 OR2T11Q8NH01 316 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 UBASH3BQ8TF42 649 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 TIFAQ96CG3 184 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SMAD5Q99717 465 aaKnown RBP4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PDCD2LQ9BRP1 358 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 RNF38Q9H0F5 515 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 PCBD2Q9H0N5 130 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 A0A087X0B3 334 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ADAM12O43184 909 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 TNFRSF21O75509 655 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CXCL14O95715 111 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ANXA5P08758 320 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 SMIM6P0DI80 62 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 KELP23276 732 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 KDELR1P24390 212 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 HK3P52790 923 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 RHAGQ02094 409 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 NOMO2Q5JPE7 1267 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 KIAA1161Q6NSJ0 714 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 BEND5Q7L4P6 421 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 OXR1Q8N573 874 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 FIG4Q92562 907 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 TBL1YQ9BQ87 522 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 WDCPQ9H6R7 721 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 CTPS2Q9NRF8 586 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 ETNK2Q9NVF9 386 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 TOR4AQ9NXH8 423 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 TAS2R9Q9NYW1 312 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 POLR1DQ9Y2S0 133 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 OR6C65A6NJZ3 312 aa4.79□□□□□ -1.64
PTPRD-203ENST00000381196 FAM159BA6NKW6 160 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms