RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 STX16O14662 325 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 CCNT2O60583 730 aaKnown RBP13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 LYPLA1O75608 230 aaPredicted RBP13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 SUPT7LO94864 414 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 CER1O95813 267 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 SERPINE1P05121 402 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 TGM1P22735 817 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 ARRB2P32121 409 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 PNLIPRP1P54315 467 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 UBE2IP63279 158 aaKnown RBP13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 BST1Q10588 318 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 STX3Q13277 289 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 GPR18Q14330 331 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 PTCHD3Q3KNS1 767 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 CFAP157Q5JU67 520 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 CDKL4Q5MAI5 379 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 ATG14Q6ZNE5 492 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 SDR16C5Q8N3Y7 309 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 ARL14Q8N4G2 192 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 MINDY1Q8N5J2 469 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 KYQ8NBH2 561 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 MAPK15Q8TD08 544 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 LRRC8CQ8TDW0 803 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 SREK1Q8WXA9 508 aaKnown RBP13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 L3HYPDHQ96EM0 354 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 MAGEB18Q96M61 343 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 MENTQ9BUN1 341 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 CAPS2Q9BXY5 557 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 SHCBP1LQ9BZQ2 653 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 CD244Q9BZW8 370 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 ADAM21Q9UKJ8 722 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 ICKQ9UPZ9 632 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 CABIN1Q9Y6J0 2220 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 FRYLO94915 3013 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 TCP11X1B4DZS4 312 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 TRIM38O00635 465 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 PPP6CO00743 305 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 DFNA5O60443 496 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 FOXD2O60548 495 aaPredicted RBP13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 STK16O75716 305 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 SLC2A4P14672 509 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 HNMTP50135 292 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 CCT8P50990 548 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 ATXN3P54252 364 aaPredicted RBP13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 GNGT1P63211 74 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 HHEXQ03014 270 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 SPEM2Q0P670 501 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 FAM219BQ5XKK7 198 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 OGFOD3Q6PK18 319 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 SUSD1Q6UWL2 747 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 SLC9B2Q86UD5 537 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 TEX9Q8N6V9 391 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 OR4E2Q8NGC2 313 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 OR6Y1Q8NGX8 325 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 PPP4R1Q8TF05 950 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 LCN9Q8WX39 176 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 PITPNM3Q9BZ71 974 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 C20orf27Q9GZN8 174 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 KIR3DX1Q9H7L2 352 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 LNPEPQ9UIQ6 1025 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 PCTPQ9UKL6 214 aa13.68□□□□□ -0.22
HERPUD1-203ENST00000379792 PCDH15Q96QU1 1955 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 LNP1A1A4G5 178 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 E7ENX8 843 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 PPM1DO15297 605 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 WDR47O94967 919 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 CHRNGP07510 517 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 NDUFS1P28331 727 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 GGT5P36269 586 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 TAP2Q03519 686 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 ASPHQ12797 758 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 PLCL1Q15111 1095 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 PCBP2Q15366 365 aaKnown RBP eCLIP13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 C6orf132Q5T0Z8 1188 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 ANKS6Q68DC2 871 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 FAM47EQ6ZV65 393 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 TRIM42Q8IWZ5 723 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 SLC35F3Q8IY50 421 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 KIAA2013Q8IYS2 634 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 TCAIMQ8N3R3 496 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 LINC01555Q8NAE3 123 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 UBTD2Q8WUN7 234 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 ATL1Q8WXF7 558 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 GSTO2Q9H4Y5 243 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 SLCO1B3Q9NPD5 702 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 SEMA4BQ9NPR2 832 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 POT1Q9NUX5 634 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 INTS7Q9NVH2 962 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 OPTCQ9UBM4 332 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 SLC22A14Q9Y267 594 aa13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 TNPO3Q9Y5L0 923 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-203ENST00000379792 CFAP54Q96N23 3096 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 E2F3O00716 465 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 RPS17P08708 135 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 PKLRP30613 574 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 SLC6A12P48065 614 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 SLC1A6P48664 564 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 BIRC2Q13490 618 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 CSRP2Q16527 193 aa13.66□□□□□ -0.22
HERPUD1-203ENST00000379792 CYP2A13Q16696 494 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms