RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 PCBD2Q9H0N5 130 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 LMAN1LQ9HAT1 526 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 PPT2Q9UMR5 302 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 OR1A2Q9Y585 309 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 PRAMEF26H0Y7S4 382 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 CLGNO14967 610 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 ULK1O75385 1050 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 RSL1D1O76021 490 aaKnown RBP10.8□□□□□ -0.68
PDPN-202ENST00000376057 FUCA1P04066 466 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 IL9P15248 144 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 STX1BP61266 288 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 CSTF3Q12996 717 aaKnown RBP10.8□□□□□ -0.68
PDPN-202ENST00000376057 C6orf136Q5SQH8 315 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 WASHC2DQ5SRD0 308 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 TMEM198Q66K66 360 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 CAPN13Q6MZZ7 669 aaPredicted RBP10.8□□□□□ -0.68
PDPN-202ENST00000376057 LCTLQ6UWM7 567 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 ABI3BPQ7Z7G0 1075 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 FAM9CQ8IZT9 166 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 MIER2Q8N344 545 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 OR2T11Q8NH01 316 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 TUBGCP3Q96CW5 907 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 SLC25A23Q9BV35 468 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 TWSG1Q9GZX9 223 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 BRF2Q9HAW0 419 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 TMED5Q9Y3A6 229 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 TIMM22Q9Y584 194 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 LRP4O75096 1905 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 H0YHG0 523 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 PI15O43692 258 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 SLC16A8O95907 504 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 ACSL1P33121 698 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 LAPTM5Q13571 262 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 ZRSR2Q15696 482 aaKnown RBP10.8□□□□□ -0.68
PDPN-202ENST00000376057 SPATS1Q496A3 300 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 ATP6AP1LQ52LC2 224 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 FBXO48Q5FWF7 155 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 CRTC3Q6UUV7 619 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 C16orf89Q6UX73 402 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 LONP2Q86WA8 852 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 ZNF480Q8WV37 535 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 BMFQ96LC9 184 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 RAB11FIP5Q9BXF6 653 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 MVB12BQ9H7P6 319 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 EFCAB1Q9HAE3 211 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 INTS7Q9NVH2 962 aaKnown RBP10.8□□□□□ -0.68
PDPN-202ENST00000376057 SIRT5Q9NXA8 310 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 WSB2Q9NYS7 404 aaPredicted RBP10.8□□□□□ -0.68
PDPN-202ENST00000376057 PRPF19Q9UMS4 504 aaKnown RBP10.8□□□□□ -0.68
PDPN-202ENST00000376057 SLC22A14Q9Y267 594 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 RNF11Q9Y3C5 154 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 FIS1Q9Y3D6 152 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 HEBP2Q9Y5Z4 205 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 DGKBQ9Y6T7 804 aa10.8□□□□□ -0.68
PDPN-202ENST00000376057 SNRPB2P08579 225 aaKnown RBP10.79□□□□□ -0.68
PDPN-202ENST00000376057 GNAZP19086 355 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 PBLDP30039 288 aaPredicted RBP10.79□□□□□ -0.68
PDPN-202ENST00000376057 BDKRB1P46663 353 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 RABIFP47224 123 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 FASTKQ14296 549 aaKnown RBP10.79□□□□□ -0.68
PDPN-202ENST00000376057 ABRAXAS2Q15018 415 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 ATG9BQ674R7 924 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 PGM2L1Q6PCE3 622 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 IL27RAQ6UWB1 636 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 DCP2Q8IU60 420 aaKnown RBP10.79□□□□□ -0.68
PDPN-202ENST00000376057 SFRP1Q8N474 314 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 CAMKK1Q8N5S9 505 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 SNX31Q8N9S9 440 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 TFGQ92734 400 aaPredicted RBP10.79□□□□□ -0.68
PDPN-202ENST00000376057 WDR92Q96MX6 357 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 HAUS8Q9BT25 410 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 MENTQ9BUN1 341 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 TRIT1Q9H3H1 467 aaKnown RBP10.79□□□□□ -0.68
PDPN-202ENST00000376057 ACTR8Q9H981 624 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 SLC52A3Q9NQ40 469 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 NOP53Q9NZM5 478 aaKnown RBP10.79□□□□□ -0.68
PDPN-202ENST00000376057 ZNHIT2Q9UHR6 403 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 TSR3Q9UJK0 312 aaKnown RBP10.79□□□□□ -0.68
PDPN-202ENST00000376057 NDRG2Q9UN36 371 aaKnown RBP10.79□□□□□ -0.68
PDPN-202ENST00000376057 PRSS38A1L453 326 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 KRBA1A5PL33 1030 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 NPPAP01160 153 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 IGHV4-34P06331 123 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 HTR1BP28222 390 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 C8orf82Q6P1X6 216 aaPredicted RBP10.79□□□□□ -0.68
PDPN-202ENST00000376057 ABRAXAS1Q6UWZ7 409 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 GCNT7Q6ZNI0 430 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 ZFAND4Q86XD8 727 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 CACUL1Q86Y37 369 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 DEFB123Q8N688 67 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 KYQ8NBH2 561 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 WDR20Q8TBZ3 569 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 ROPN1LQ96C74 230 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 REPS1Q96D71 796 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 PPP1R36Q96LQ0 422 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 CDK15Q96Q40 435 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 OR4K3Q96R72 315 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 SUFUQ9UMX1 484 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 BTRCQ9Y297 605 aa10.79□□□□□ -0.68
PDPN-202ENST00000376057 KCNE2Q9Y6J6 123 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms