RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 LAMB4A4D0S4 1761 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 CLIC1O00299 241 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 EI24O14681 340 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 RFC2P35250 354 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 CCR10P46092 362 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 CASP9P55211 416 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 PRAMEF14Q5SWL7 426 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 PRAMEF13Q5VWM6 474 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 TMEM135Q86UB9 458 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 ZNF598Q86UK7 904 aaKnown RBP13.33□□□□□ -0.27
C9orf47-203ENST00000375851 TTC29Q8NA56 475 aaPredicted RBP13.33□□□□□ -0.27
C9orf47-203ENST00000375851 MOSPD2Q8NHP6 518 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 HM13Q8TCT9 377 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 S100ZQ8WXG8 99 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 PPP1R14AQ96A00 147 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 SIPA1Q96FS4 1042 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 NODALQ96S42 347 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 ZBTB26Q9HCK0 441 aa13.33□□□□□ -0.27
C9orf47-203ENST00000375851 BHMG1C9JSJ3 638 aaPredicted RBP13.33□□□□□ -0.28
C9orf47-203ENST00000375851 MAFKO60675 156 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 MMP20O60882 483 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 CBSLP0DN79 551 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 CD247P20963 164 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 AKT2P31751 481 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 CBSP35520 551 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 HSD17B2P37059 387 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 CAPGP40121 348 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 LRRC32Q14392 662 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 PDE12Q6L8Q7 609 aaKnown RBP13.33□□□□□ -0.28
C9orf47-203ENST00000375851 C17orf99Q6UX52 265 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 GOLGA7Q7Z5G4 137 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 LRRTM4Q86VH4 590 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 ZZZ3Q8IYH5 903 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 SCAIQ8N9R8 606 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 S100A13Q99584 98 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 IL12RB2Q99665 862 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 RAB11FIP5Q9BXF6 653 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 FANCEQ9HB96 536 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 FBRSL1Q9HCM7 1045 aaKnown RBP13.33□□□□□ -0.28
C9orf47-203ENST00000375851 ZSCAN32Q9NX65 697 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 RNF186Q9NXI6 227 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 CALML5Q9NZT1 146 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 PCDHGA4Q9Y5G9 962 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 CPN2P22792 545 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 DDI2Q5TDH0 399 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 OR4F3Q6IEY1 312 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 MBOAT1Q6ZNC8 495 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 TP53INP2Q8IXH6 220 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 NXPE1Q8N323 547 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 ZNF296Q8WUU4 475 aaPredicted RBP13.33□□□□□ -0.28
C9orf47-203ENST00000375851 SLC35G5Q96KT7 338 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 KCNA7Q96RP8 456 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 TRMT61BQ9BVS5 477 aaKnown RBP13.33□□□□□ -0.28
C9orf47-203ENST00000375851 ELAC1Q9H777 363 aaKnown RBP13.33□□□□□ -0.28
C9orf47-203ENST00000375851 CXorf21Q9HAI6 301 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 CMTM6Q9NX76 183 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 MTRRQ9UBK8 725 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 MRPS17Q9Y2R5 130 aaKnown RBP13.33□□□□□ -0.28
C9orf47-203ENST00000375851 EDDM13A0A1B0GTR0 161 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 GSK3BP49841 420 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 UFM1P61960 85 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 NDUFAF6Q330K2 333 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 NEK5Q6P3R8 708 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 ENPP7Q6UWV6 458 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 SLCO6A1Q86UG4 719 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 CADM2Q8N3J6 435 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 TFGQ92734 400 aaPredicted RBP13.33□□□□□ -0.28
C9orf47-203ENST00000375851 FEM1AQ9BSK4 669 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 SLC29A3Q9BZD2 475 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 PDE10AQ9Y233 779 aa13.33□□□□□ -0.28
C9orf47-203ENST00000375851 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 MBLAC1A4D2B0 266 aaPredicted RBP13.32□□□□□ -0.28
C9orf47-203ENST00000375851 ZNF840PA6NDX5 716 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 ARPC2O15144 300 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 NOBOXO60393 691 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 MYL9P24844 172 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 CCR8P51685 355 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 SEMA3AQ14563 771 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 RTP2Q5QGT7 225 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 PIK3R6Q5UE93 754 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 MZT2BQ6NZ67 158 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 CEP68Q76N32 757 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 SAMD14Q8IZD0 417 aaPredicted RBP13.32□□□□□ -0.28
C9orf47-203ENST00000375851 KAT2AQ92830 837 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 C1orf21Q9H246 121 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 FAM53CQ9NYF3 392 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 GIMAP2Q9UG22 337 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 CFAP20Q9Y6A4 193 aaKnown RBP13.32□□□□□ -0.28
C9orf47-203ENST00000375851 NME6O75414 186 aaPredicted RBP13.32□□□□□ -0.28
C9orf47-203ENST00000375851 TRMUO75648 421 aaKnown RBP13.32□□□□□ -0.28
C9orf47-203ENST00000375851 CCNB2O95067 398 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 CSF2RAP15509 400 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 SRP54P61011 504 aaKnown RBP13.32□□□□□ -0.28
C9orf47-203ENST00000375851 FAAH2Q6GMR7 532 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 SLC2A7Q6PXP3 512 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 AGTRAPQ6RW13 159 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 CXXC5Q7LFL8 322 aaKnown RBP13.32□□□□□ -0.28
C9orf47-203ENST00000375851 NUDT13Q86X67 352 aa13.32□□□□□ -0.28
C9orf47-203ENST00000375851 IRF7Q92985 503 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms