RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 UTP20O75691 2785 aaKnown RBP22.31■■□□□ 1.16
C9orf47-202ENST00000375850 CCDC162PA2VCL2 907 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 GRID2IPA4D2P6 1211 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 SOWAHDA6NJG2 315 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 LDLRP01130 860 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 UMODP07911 640 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 RNF224P0DH78 156 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 GCGRP47871 477 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 TCTE1Q5JU00 501 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 IRAK1BP1Q5VVH5 260 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 UNC5DQ6UXZ4 953 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 DCUN1D3Q8IWE4 304 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 RAB11FIP5Q9BXF6 653 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 SLC26A1Q9H2B4 701 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 ERRFI1Q9UJM3 462 aaPredicted RBP22.31■■□□□ 1.16
C9orf47-202ENST00000375850 MRFAP1Q9Y605 127 aa22.31■■□□□ 1.16
C9orf47-202ENST00000375850 A1L4Q6 167 aa22.3■■□□□ 1.16
C9orf47-202ENST00000375850 CNOT3O75175 753 aaKnown RBP22.3■■□□□ 1.16
C9orf47-202ENST00000375850 MAGP20916 626 aa22.3■■□□□ 1.16
C9orf47-202ENST00000375850 ALAS2P22557 587 aa22.3■■□□□ 1.16
C9orf47-202ENST00000375850 PEBP1P30086 187 aaKnown RBP22.3■■□□□ 1.16
C9orf47-202ENST00000375850 CRB2Q5IJ48 1285 aa22.3■■□□□ 1.16
C9orf47-202ENST00000375850 AARS2Q5JTZ9 985 aaKnown RBP22.3■■□□□ 1.16
C9orf47-202ENST00000375850 OVCH1Q7RTY7 1134 aa22.3■■□□□ 1.16
C9orf47-202ENST00000375850 MCATQ8IVS2 390 aaKnown RBP22.3■■□□□ 1.16
C9orf47-202ENST00000375850 OR13J1Q8NGT2 312 aa22.3■■□□□ 1.16
C9orf47-202ENST00000375850 PPP4R1Q8TF05 950 aa22.3■■□□□ 1.16
C9orf47-202ENST00000375850 WDR77Q9BQA1 342 aaPredicted RBP22.3■■□□□ 1.16
C9orf47-202ENST00000375850 TMEM121Q9BTD3 319 aa22.3■■□□□ 1.16
C9orf47-202ENST00000375850 CARD6Q9BX69 1037 aa22.3■■□□□ 1.16
C9orf47-202ENST00000375850 FRMD8P1Q9BZ68 369 aaPredicted RBP22.3■■□□□ 1.16
C9orf47-202ENST00000375850 PCDHGA10Q9Y5H3 936 aa22.3■■□□□ 1.16
C9orf47-202ENST00000375850 DOPEY1Q5JWR5 2465 aa22.3■■□□□ 1.16
C9orf47-202ENST00000375850 OR51F1A6NGY5 319 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 SUN1O94901 812 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 APOA4P06727 396 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 ITGAXP20702 1163 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 CD9P21926 228 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 ADRA1DP25100 572 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 ITGA3P26006 1051 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 FDFT1P37268 417 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 GDF10P55107 478 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 ACVR1Q04771 509 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 GRM7Q14831 915 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 SLC9A5Q14940 896 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 TSTD2Q5T7W7 516 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 PRAMEF13Q5VWM6 474 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 TTC23LQ6PF05 361 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 OR52K1Q8NGK4 314 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 OR4L1Q8NH43 312 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 HDAC10Q969S8 669 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 LACRTQ9GZZ8 138 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 PIH1D1Q9NWS0 290 aaKnown RBP22.29■■□□□ 1.16
C9orf47-202ENST00000375850 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.29■■□□□ 1.16
C9orf47-202ENST00000375850 IMPACTQ9P2X3 320 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 PLAGL1Q9UM63 463 aa22.29■■□□□ 1.16
C9orf47-202ENST00000375850 PRRC2CQ9Y520 2896 aaKnown RBP22.29■■□□□ 1.16
C9orf47-202ENST00000375850 PCSK5Q92824 1860 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 DSCR3O14972 297 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 GPC4O75487 556 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 GOT2P00505 430 aaKnown RBP22.28■■□□□ 1.16
C9orf47-202ENST00000375850 CCR7P32248 378 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 HSPA14Q0VDF9 509 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 TMED2Q15363 201 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 FAM214AQ32MH5 1076 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 CCDC38Q502W7 563 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 FASTKD1Q53R41 847 aaKnown RBP22.28■■□□□ 1.16
C9orf47-202ENST00000375850 AGAP7PQ5VUJ5 663 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 PPP1R21Q6ZMI0 780 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 TTLL10Q6ZVT0 673 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 RAB42Q8N4Z0 105 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 TTC29Q8NA56 475 aaPredicted RBP22.28■■□□□ 1.16
C9orf47-202ENST00000375850 ST6GALNAC3Q8NDV1 305 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 OR2L8Q8NGY9 312 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 UBE2Q2Q8WVN8 375 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 AGAP4Q96P64 663 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 MENTQ9BUN1 341 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 SLC22A11Q9NSA0 550 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 CDC23Q9UJX2 597 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 ANAPC5Q9UJX4 755 aa22.28■■□□□ 1.16
C9orf47-202ENST00000375850 REXO2Q9Y3B8 237 aaKnown RBP22.28■■□□□ 1.16
C9orf47-202ENST00000375850 TARM1B6A8C7 271 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 OR1I1O60431 355 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 CTSBP07858 339 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 GLRBP48167 497 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 PRAMEP78395 509 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 IGFL2Q6UWQ7 119 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 NAPRTQ6XQN6 538 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 KIAA1328Q86T90 577 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 LINC01555Q8NAE3 123 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 OR6P1Q8NGX9 317 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 ZUFSPQ96AP4 578 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 ZNF285Q96NJ3 590 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 SLC6A20Q9NP91 592 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 SEMA3GQ9NS98 782 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 CUTCQ9NTM9 273 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 FBXL4Q9UKA2 621 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 SLC39A10Q9ULF5 831 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 HIVEP3Q5T1R4 2406 aa22.27■■□□□ 1.16
C9orf47-202ENST00000375850 E7EVH7 732 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms