RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 KCTD13Q8WZ19 329 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 SLC38A4Q969I6 547 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 P2RY11Q96G91 374 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 DUSP21Q9H596 190 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 CCSER2Q9H7U1 834 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 AKTIPQ9H8T0 292 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 FZD10Q9ULW2 581 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 FAM92AA1XBS5 289 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 TRIM77I1YAP6 450 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 IPO13O94829 963 aaKnown RBP11.89□□□□□ -0.51
C9orf3-203ENST00000375315 MATN4O95460 622 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 IFI30P13284 250 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 MASP1P48740 699 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 MLLT6P55198 1093 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-203ENST00000375315 SLC35A2P78381 396 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 DPYSL2Q16555 572 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 FAM214AQ32MH5 1076 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 RFX4Q33E94 735 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 ARMC4Q5T2S8 1044 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 CLEC6AQ6EIG7 209 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 TXNDC11Q6PKC3 985 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 AMIGO1Q86WK6 493 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 OR8H2Q8N162 312 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 KBTBD8Q8NFY9 601 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 ELMO1Q92556 727 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 APOL2Q9BQE5 337 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 VN1R3Q9BXE9 311 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 NXF2Q9GZY0 626 aaKnown RBP11.89□□□□□ -0.51
C9orf3-203ENST00000375315 CRISPLD2Q9H0B8 497 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 KCNN2Q9H2S1 579 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 ZNF556Q9HAH1 456 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 ACOT13Q9NPJ3 140 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 DNAJB9Q9UBS3 223 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 OAS3Q9Y6K5 1087 aaKnown RBP11.89□□□□□ -0.51
C9orf3-203ENST00000375315 RALGAPA2Q2PPJ7 1873 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 PRUNE2Q8WUY3 3088 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 XIRP2A4UGR9 3374 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 LEUTXA8MZ59 168 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 C9JVG2 144 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 PRRG1O14668 218 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 BET1O15155 118 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 MRPS14O60783 128 aaKnown RBP11.89□□□□□ -0.51
C9orf3-203ENST00000375315 OAZ2O95190 189 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 JUNDP17535 347 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 HRH2P25021 359 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 CD6P30203 668 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 YBX1P67809 324 aaKnown RBP11.89□□□□□ -0.51
C9orf3-203ENST00000375315 NCBP2-AS2Q69YL0 99 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 CNKSR3Q6P9H4 555 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 PID1Q7Z2X4 250 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 CEP19Q96LK0 163 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 TRMOQ9BU70 441 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 COMMD8Q9NX08 183 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 CCDC59Q9P031 241 aaKnown RBP11.89□□□□□ -0.51
C9orf3-203ENST00000375315 LYVE1Q9Y5Y7 322 aa11.89□□□□□ -0.51
C9orf3-203ENST00000375315 PCM1Q15154 2024 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 A0A087X1B8 175 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 SLC12A8A0AV02 714 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 CFL1P23528 166 aaKnown RBP11.88□□□□□ -0.51
C9orf3-203ENST00000375315 FMO3P31513 532 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 MAPK12P53778 367 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 SLC12A2P55011 1212 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 KCNK10P57789 538 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 WDR5P61964 334 aaKnown RBP11.88□□□□□ -0.51
C9orf3-203ENST00000375315 ZNF460Q14592 562 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 SPESP1Q6UW49 350 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 BHLHA9Q7RTU4 235 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 LHFPL5Q8TAF8 219 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 TSPEARQ8WU66 669 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 IGSF21Q96ID5 467 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 FYTTD1Q96QD9 318 aaKnown RBP11.88□□□□□ -0.51
C9orf3-203ENST00000375315 PKMYT1Q99640 499 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 KIFC1Q9BW19 673 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 PRDM12Q9H4Q4 367 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 LIN7BQ9HAP6 207 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 PCDHGB2Q9Y5G2 931 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 OR6C70A6NIJ9 312 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 ATP6V1G2-DDX39BF2Z307 99 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 STX7O15400 261 aaKnown RBP11.88□□□□□ -0.51
C9orf3-203ENST00000375315 UGT2B17O75795 530 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 GJA1P17302 382 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 TGFBR2P37173 567 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 UGT2B15P54855 530 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 FAPQ12884 760 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 PLD1Q13393 1074 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 PSTKQ8IV42 348 aaKnown RBP11.88□□□□□ -0.51
C9orf3-203ENST00000375315 ZNF540Q8NDQ6 660 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 HEXDCQ8WVB3 486 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 DEDD2Q8WXF8 326 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 ITPAQ9BY32 194 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 UGT2B28Q9BY64 529 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 ZNF304Q9HCX3 659 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 C14orf119Q9NWQ9 140 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 B3GNT2Q9NY97 397 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 GLTPQ9NZD2 209 aa11.88□□□□□ -0.51
C9orf3-203ENST00000375315 TRMT6Q9UJA5 497 aaKnown RBP11.88□□□□□ -0.51
C9orf3-203ENST00000375315 PDCD11Q14690 1871 aaKnown RBP11.87□□□□□ -0.51
C9orf3-203ENST00000375315 FAM95CA0A1B0GW59 222 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 A0A1W2PP18 115 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 A8MT66 165 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms