RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 H0Y626 953 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 PSMD11O00231 422 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 IFRD1O00458 451 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 TNFRSF10BO14763 440 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 SLC16A6O15403 523 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 FAM20BO75063 409 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 TRIM16O95361 564 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 EFEMP2O95967 443 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 GSNP06396 782 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 CD6P30203 668 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 ALDH7A1P49419 539 aaKnown RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 CLK1P49759 484 aaKnown RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 SERINC3Q13530 473 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 LINC00299Q6ZSB3 139 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 MILR1Q7Z6M3 343 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 AKAP14Q86UN6 197 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 EFHBQ8N7U6 833 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 Q8N9G6 341 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 CD200R1Q8TD46 325 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 NETO1Q8TDF5 533 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 CAPSLQ8WWF8 208 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 FAM120BQ96EK7 910 aaKnown RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 MYOCQ99972 504 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 BCL7BQ9BQE9 202 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 MIR1-1HGQ9H1L0 117 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 RASSF1Q9NS23 344 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 DCAF13Q9NV06 445 aaKnown RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 TMEM45AQ9NWC5 275 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 VNN3Q9NY84 501 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF682O95780 498 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 PGRP06401 933 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 CD36P16671 472 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 EN2P19622 333 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 GRK3P35626 688 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 GPR15P49685 360 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF140P52738 457 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 PPP5CP53041 499 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 WDR5P61964 334 aaKnown RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 SLC35A2P78381 396 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 IL18R1Q13478 541 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 GTF2H2Q13888 395 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 DDR2Q16832 855 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 COLEC12Q5KU26 742 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 ATAD3BQ5T9A4 648 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 LAIR1Q6GTX8 287 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 GTF2H2CQ6P1K8 395 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 CYP4Z1Q86W10 505 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 MSRB3Q8IXL7 192 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF683Q8IZ20 524 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 ATP6V0D2Q8N8Y2 350 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 EFHD2Q96C19 240 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 OR52E6Q96RD3 313 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 SLIRPQ9GZT3 109 aaKnown RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 C6orf62Q9GZU0 229 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 CWH43Q9H720 699 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 IPPKQ9H8X2 491 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 FKBPLQ9UIM3 349 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 PKP3Q9Y446 797 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 PCDHGB1Q9Y5G3 927 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 COL4A6Q14031 1691 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 CEP350Q5VT06 3117 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 A0A0U1RQS6 177 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 SNPHO15079 494 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 RGS10O43665 173 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 MYCLP1P12525 358 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 TCEA1P23193 301 aaKnown RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 MC4RP32245 332 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 SYT16Q17RD7 645 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 SLC39A12Q504Y0 691 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 VARS2Q5ST30 1063 aaKnown RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 CES5AQ6NT32 575 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 FUT10Q6P4F1 479 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 TAS2R42Q7RTR8 314 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 LIX1Q8N485 282 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 RHOXF1Q8NHV9 184 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 GPR152Q8TDT2 470 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF566Q969W8 418 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 SLC39A13Q96H72 371 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 REXO5Q96IC2 774 aaKnown RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 PPP3R2Q96LZ3 170 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 SH3GL1Q99961 368 aa10.84□□□□□ -0.67
CCDC40-203ENST00000374877 KAT8Q9H7Z6 458 aaKnown RBP10.84□□□□□ -0.67
CCDC40-203ENST00000374877 TET1Q8NFU7 2136 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 EFCAB9A8MZ26 197 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 H7C4K7 107 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 OR7A17O14581 309 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 GPR39O43194 453 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 DIRAS1O95057 198 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 EPOP01588 193 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 S100BP04271 92 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-203ENST00000374877 LCKP06239 509 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 S100A1P23297 94 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 HSPA7P48741 367 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 KIAA0040Q15053 153 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 NFE2Q16621 373 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-203ENST00000374877 CTSL3PQ5NE16 218 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 SYT6Q5T7P8 510 aaPredicted RBP10.83□□□□□ -0.68
CCDC40-203ENST00000374877 AHSA2Q719I0 299 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 ZDHHC21Q8IVQ6 265 aa10.83□□□□□ -0.68
CCDC40-203ENST00000374877 MDGA1Q8NFP4 955 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms