RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 RASGEF1AQ8N9B8 481 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 MAGEE2Q8TD90 523 aaPredicted RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 FBXL20Q96IG2 436 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 MTERF1Q99551 399 aaKnown RBP15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 C19orf43Q9BQ61 176 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 INPP5KQ9BT40 448 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 CERS4Q9HA82 394 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 TBC1D14Q9P2M4 693 aa15.57■□□□□ 0.08
CNKSR1-202ENST00000374253 OTOL1A6NHN0 477 aaPredicted RBP15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 WASH3PC4AMC7 463 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 ARNTLO00327 626 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 GPIP06744 558 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 C8GP07360 202 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 ELFN1P0C7U0 828 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 ZNF23P17027 643 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 EFNA1P20827 205 aaPredicted RBP15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 PDHA2P29803 388 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 FPGSQ05932 587 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 RBM44Q6ZP01 1051 aaKnown RBP15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 RAVER1Q8IY67 606 aaKnown RBP15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 PAPOLBQ9NRJ5 636 aaKnown RBP15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 LINC01553A4QN01 128 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 ARHGEF33A8MVX0 844 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 CFAP99D6REC4 459 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 K7ESM1 405 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 ACOX3O15254 700 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 CYP2A7P20853 494 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 DDX6P26196 483 aaKnown RBP eCLIP15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 SLC6A12P48065 614 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 PFN3P60673 137 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 RPS14P62263 151 aaKnown RBP15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 GBX1Q14549 363 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 SYTL3Q4VX76 610 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 HENMT1Q5T8I9 393 aaKnown RBP15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 ENPP6Q6UWR7 440 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 CACUL1Q86Y37 369 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 OR2T12Q8NG77 320 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 MCOLN3Q8TDD5 553 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 AP2M1Q96CW1 435 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 CLMPQ9H6B4 373 aa15.56■□□□□ 0.08
CNKSR1-202ENST00000374253 PRRT4C9JH25 899 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 GFYI3L273 518 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 PABPC4LP0CB38 370 aaKnown RBP15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 CD22P20273 847 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 CDKN2CP42773 168 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 IST1P53990 364 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 CYP4F3Q08477 520 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 LAPTM5Q13571 262 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 ZNF284Q2VY69 593 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 AASDHQ4L235 1098 aaPredicted RBP15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 ZNF805Q5CZA5 627 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 CYP2U1Q7Z449 544 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 ZNF696Q9H7X3 374 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 OLAHQ9NV23 265 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 DNAJC11Q9NVH1 559 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 PPT2Q9UMR5 302 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 PCDHB3Q9Y5E6 796 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 KCNE1BA0A087WTH5 132 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 E7EQ34 232 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 GSTA4O15217 222 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 XYLBO75191 536 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 TULP3O75386 442 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 ADH5P11766 374 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 ZNF30P17039 623 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 PFKLP17858 780 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 IRX1P78414 480 aaPredicted RBP15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 TXNL4AP83876 142 aaKnown RBP15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 MAD2L1Q13257 205 aaPredicted RBP15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 NAE1Q13564 534 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 ATP6AP1Q15904 470 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 LRRC70Q7Z2Q7 622 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 ASZ1Q8WWH4 475 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 TFAP2CQ92754 450 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 ZNF707Q96C28 371 aaPredicted RBP15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 ADI1Q9BV57 179 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 GPRC5BQ9NZH0 403 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 PRKAG2Q9UGJ0 569 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 PCDHB14Q9Y5E9 798 aa15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 TCF20Q9UGU0 1960 aaKnown RBP15.55■□□□□ 0.08
CNKSR1-202ENST00000374253 SDC1P18827 310 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 RPL5P46777 297 aaKnown RBP15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 NKG7Q16617 165 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 ZIK1Q3SY52 487 aaPredicted RBP15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 XKR6Q5GH73 641 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 PLEKHS1Q5SXH7 462 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 ZDHHC20Q5W0Z9 365 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 ANKRD26P1Q6NSI1 321 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 FBXO46Q6PJ61 603 aaPredicted RBP15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 TMEM220Q6QAJ8 160 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 LIPIQ6XZB0 460 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 ADGRD2Q7Z7M1 963 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 SLC29A3Q9BZD2 475 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 WBP1LQ9NX94 342 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 LIMD1Q9UGP4 676 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 SNX6Q9UNH7 406 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 SNAP29O95721 258 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 LDLRP01130 860 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 MAP4P27816 1152 aaKnown RBP15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 IRF8Q02556 426 aa15.54■□□□□ 0.08
CNKSR1-202ENST00000374253 TMEM115Q12893 351 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms