RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 EI24O14681 340 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ANGPT2O15123 496 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 MDM4O15151 490 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 INMTO95050 263 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF865P0CJ78 1059 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ALOX12P18054 663 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 TGM2P21980 687 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 LMO2P25791 158 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 SHMT2P34897 504 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ELK3P41970 407 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 RPS9P46781 194 aaKnown RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ATP5OP48047 213 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 RPL34P49207 117 aaKnown RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 GBX2P52951 348 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 BCAR1P56945 870 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 RGS1Q08116 209 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 KCNC3Q14003 757 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 INPP5AQ14642 412 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 PCLAFQ15004 111 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 CA9Q16790 459 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF404Q494X3 552 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 XKR4Q5GH76 650 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 RPS26P11Q5JNZ5 115 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 LIPIQ6XZB0 460 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 TIFABQ6ZNK6 161 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 TSPYL5Q86VY4 417 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ADGRG3Q86Y34 549 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 TXNDC5Q8NBS9 432 aaKnown RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 SETD6Q8TBK2 473 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 PHOSPHO2Q8TCD6 241 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 SLC22A17Q8WUG5 538 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 RTP4Q96DX8 246 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 KLHL15Q96M94 604 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 C11orf84Q9BUA3 381 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 MLPHQ9BV36 600 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 SNRNP25Q9BV90 132 aaKnown RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF416Q9BWM5 594 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 REXO4Q9GZR2 422 aaKnown RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 CLEC4MQ9H2X3 399 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ING3Q9NXR8 418 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 CD300AQ9UGN4 299 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 CPA4Q9UI42 421 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 NUDT5Q9UKK9 219 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 HCN2Q9UL51 889 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 EMCNQ9ULC0 261 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 OAZ3Q9UMX2 235 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 SCML1Q9UN30 329 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 BTBD3Q9Y2F9 522 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 PCDHB12Q9Y5F1 795 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 PSAT1Q9Y617 370 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 TEX264Q9Y6I9 313 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 METTL15A6NJ78 407 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 HACD1B0YJ81 288 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 HAS3O00219 553 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 DFNA5O60443 496 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 BRINP1O60477 761 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 OR2B3O76000 313 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 FCGR1AP12314 374 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 KCNE1P15382 129 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 HOXC13P31276 330 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 CD68P34810 354 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 TSPAN7P41732 249 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 RECQLP46063 649 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 BCAT1P54687 386 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ARPP19P56211 112 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ACOX1Q15067 660 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 BTBD16Q32M84 506 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 GTDC1Q4AE62 458 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 WIPI1Q5MNZ9 446 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 UBXN11Q5T124 520 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ARHGAP36Q6ZRI8 547 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 SLC26A9Q7LBE3 791 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ZSWIM9Q86XI8 627 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 P3H2Q8IVL5 708 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 TMEM199Q8N511 208 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 PARP16Q8N5Y8 322 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 MEIOBQ8N635 442 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF565Q8N9K5 539 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 KDM1BQ8NB78 822 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 MAPK15Q8TD08 544 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 CLEC4CQ8WTT0 213 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 DNAJA4Q8WW22 397 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 CENPIQ92674 756 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 USP7Q93009 1102 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 LPPQ93052 612 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 FAF2Q96CS3 445 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF670Q9BS34 389 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 HDHD5Q9BXW7 423 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 TOR3AQ9H497 397 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 C8orf33Q9H7E9 229 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-203ENST00000372232 CATSPERBQ9H7T0 1116 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ZBTB26Q9HCK0 441 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 HPS4Q9NQG7 708 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 PPP1R14DQ9NXH3 145 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF224Q9NZL3 707 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 TRPM5Q9NZQ8 1165 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 MFHAS1Q9Y4C4 1052 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 PCDHGB1Q9Y5G3 927 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 KAT6AQ92794 2004 aa8.66□□□□□ -1.02
ATG4A-203ENST00000372232 BCLAF3A2AJT9 711 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms