RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ADGRE1Q14246 886 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 INAVAQ3KP66 663 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 FAM129CQ86XR2 697 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 SLC34A3Q8N130 599 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 CBR4Q8N4T8 237 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 PCDH19Q8TAB3 1148 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 SRMSQ9H3Y6 488 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 TUBG2Q9NRH3 451 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 KLHL42Q9P2K6 505 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 ZNF490Q9ULM2 529 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 BMP7P18075 431 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 MAGEA11P43364 429 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 HNMTP50135 292 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 IDH3AP50213 366 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 GRM2Q14416 872 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 FBXL22Q6P050 247 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 DPPA2Q7Z7J5 298 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 NIPA2Q8N8Q9 360 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 SRFBP1Q8NEF9 429 aaKnown RBP13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 VANGL1Q8TAA9 524 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 SUN3Q8TAQ9 357 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 LRTOMTQ8WZ04 291 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 ROPN1LQ96C74 230 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 SEMA3GQ9NS98 782 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 SALL4Q9UJQ4 1053 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 LRRC14BA6NHZ5 514 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 TULP3O75386 442 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 ZNF14P17017 642 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 ITIH1P19827 911 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 RPIAP49247 311 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 CORO6Q6QEF8 472 aa13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 GPN1Q9HCN4 374 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 PDP1Q9P0J1 537 aaPredicted RBP13.07□□□□□ -0.32
RAPGEF1-201ENST00000372189 WNT9AO14904 365 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 FFAR2O15552 330 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 HLA-DQA2P01906 255 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 CTSKP43235 329 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 MANFP55145 182 aaKnown RBP13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 RAPSNQ13702 412 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 FASTKD3Q14CZ7 662 aaKnown RBP13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 MORN1Q5T089 497 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 RNF44Q7L0R7 432 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 GALNT5Q7Z7M9 940 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 OVCA2Q8WZ82 227 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 SMOC2Q9H3U7 446 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 WDR26Q9H7D7 661 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 FETUBQ9UGM5 382 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 H3BNH8 94 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 SPARCP09486 303 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 MPP1Q00013 466 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 P2RY8Q86VZ1 359 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 OR2AG1Q9H205 316 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 PPIEQ9UNP9 301 aaKnown RBP13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 LEFTY2O00292 366 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 STK16O75716 305 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 PET100P0DJ07 73 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 PTGER3P43115 390 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 OMPP47874 163 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 TNFAIP8L3Q5GJ75 292 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 MSANTD2Q6P1R3 559 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 ELMOD2Q8IZ81 293 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 ADGRG2Q8IZP9 1017 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 SVOPLQ8N434 492 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 UBR7Q8N806 425 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 TWIST2Q8WVJ9 160 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 LENG8Q96PV6 779 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 GAL3ST1Q99999 423 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 TCEAL7Q9BRU2 100 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 MIOSQ9NXC5 875 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 COQ6Q9Y2Z9 468 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 MYADML2A6NDP7 307 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 CCL22O00626 93 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 SLC22A2O15244 555 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 MAFKO60675 156 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 CCNYL3P0C7X3 344 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 IFI30P13284 250 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 EDNRBP24530 442 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 NMBRP28336 390 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 NSG1P42857 185 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 HADHBP55084 474 aaKnown RBP13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 LIPEQ05469 1076 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 UPP1Q16831 310 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 VWA5B1Q5TIE3 1220 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 ZNF776Q68DI1 518 aaPredicted RBP13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 ENPP7Q6UWV6 458 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 SFXN1Q9H9B4 322 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 FBRSL1Q9HCM7 1045 aaKnown RBP13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 KCNIP3Q9Y2W7 256 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 U3KQV3 271 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 FAM240BA0A1B0GVZ2 78 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 ANGPTL1O95841 491 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 SEPHS1P49903 392 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 KCNQ1P51787 676 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 FAM92BQ6ZTR7 304 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 FOXRED2Q8IWF2 684 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 TWNKQ96RR1 684 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 DTLQ9NZJ0 730 aa13.06□□□□□ -0.32
RAPGEF1-201ENST00000372189 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms