RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 RWDD2BP57060 319 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 NUCB2P80303 420 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 CYCSP99999 105 aaKnown RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 GABPB1Q06547 395 aaPredicted RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 DMPKQ09013 629 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 CALCOCO2Q13137 446 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 PRPF4BQ13523 1007 aaKnown RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 SLMAPQ14BN4 828 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 MED22Q15528 200 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 TBCEQ15813 527 aaPredicted RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 TMEM95Q3KNT9 176 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 MOGAT2Q3SYC2 334 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 TTC31Q49AM3 519 aaPredicted RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 HIGD2BQ4VC39 106 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 KLHL26Q53HC5 615 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 RARS2Q5T160 578 aaKnown RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 INTS11Q5TA45 600 aaKnown RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 AP1ARQ63HQ0 302 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 LINGO4Q6UY18 593 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 LRRC49Q8IUZ0 686 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 EFCAB13Q8IY85 973 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 KIRREL3Q8IZU9 778 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 MAPKAPK5-AS1Q8N8E1 139 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 PPFIBP2Q8ND30 876 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 C17orf47Q8NEP4 570 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 VANGL1Q8TAA9 524 aaPredicted RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 TBC1D16Q8TBP0 767 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 RNF128Q8TEB7 428 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 TBC1D31Q96DN5 1066 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 ARSGQ96EG1 525 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 RSRC1Q96IZ7 334 aaKnown RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 FAM81BQ96LP2 452 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 PRICKLE1Q96MT3 831 aaPredicted RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 DACH2Q96NX9 599 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 GSDMAQ96QA5 445 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 SPAG5Q96R06 1193 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 GAL3ST4Q96RP7 486 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 C1QTNF1Q9BXJ1 281 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 PUS3Q9BZE2 481 aaKnown RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 TRIM7Q9C029 511 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 XPO4Q9C0E2 1151 aaKnown RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 VN1R1Q9GZP7 353 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 PLK3Q9H4B4 646 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 RRAGDQ9NQL2 400 aaPredicted RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 SDR39U1Q9NRG7 319 aaPredicted RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 DIAPH3Q9NSV4 1193 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 QPCTLQ9NXS2 382 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 CLIC5Q9NZA1 410 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 EHD2Q9NZN4 543 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 SEPT10Q9P0V9 454 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 RABL2AQ9UBK7 228 aaPredicted RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 CLIP2Q9UDT6 1046 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 ZMAT5Q9UDW3 170 aaKnown RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 PRO0461Q9UI25 63 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 MTMR6Q9Y217 621 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 ITM2BQ9Y287 266 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 ATP6V0A2Q9Y487 856 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 LYVE1Q9Y5Y7 322 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 PIK3R4Q99570 1358 aa1.92□□□□□ -2.1
RNU4-42P-201ENST00000364738 SOS1Q07889 1333 aaPredicted RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 A6NLC8 198 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 F8VZ95 297 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 FIBPO43427 364 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 KINO60870 393 aaKnown RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 ERLIN1O75477 346 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 DFFBO76075 338 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 HPRP00739 348 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 EIF2S1P05198 315 aaKnown RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 CLEC3BP05452 202 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 SRPRAP08240 638 aaKnown RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 PRKACGP22612 351 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 ALDH1B1P30837 517 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 RDXP35241 583 aaKnown RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 LEPRP48357 1165 aaKnown RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 PPM1FP49593 454 aaPredicted RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 CCR9P51686 369 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 B3GALT5-AS1P59052 145 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 RPS3AP61247 264 aaKnown RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 HERV-K104P61576 105 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 CCDC173Q0VFZ6 552 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 PNRC1Q12796 327 aaPredicted RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 SIM2Q14190 667 aaPredicted RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 SMC1AQ14683 1233 aaKnown RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 SYCP1Q15431 976 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 CCDC152Q4G0S7 254 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 ALFQ53S48 1182 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 CCDC122Q5T0U0 273 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 GRTP1Q5TC63 336 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 GKAP1Q5VSY0 366 aaPredicted RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 SEL1L3Q68CR1 1132 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 TTC19Q6DKK2 380 aaPredicted RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 FAAH2Q6GMR7 532 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 NCEH1Q6PIU2 408 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 CCDC80Q76M96 950 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 ZNF354CQ86Y25 554 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 ARID3BQ8IVW6 561 aaPredicted RBP1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 FAM114A1Q8IWE2 563 aa1.91□□□□□ -2.1
RNU4-42P-201ENST00000364738 TEX9Q8N6V9 391 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms