RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 SYT16Q17RD7 645 aa10.34□□□□□ -0.75
SMC3-201ENST00000361804 INAVAQ3KP66 663 aa10.34□□□□□ -0.75
SMC3-201ENST00000361804 KCNJ9Q92806 393 aa10.34□□□□□ -0.75
SMC3-201ENST00000361804 CASD1Q96PB1 797 aa10.34□□□□□ -0.75
SMC3-201ENST00000361804 MUC13Q9H3R2 512 aa10.34□□□□□ -0.75
SMC3-201ENST00000361804 ATP13A3Q9H7F0 1226 aa10.34□□□□□ -0.75
SMC3-201ENST00000361804 VPS51Q9UID3 782 aa10.34□□□□□ -0.75
SMC3-201ENST00000361804 ENPP5Q9UJA9 477 aa10.34□□□□□ -0.75
SMC3-201ENST00000361804 SNX5Q9Y5X3 404 aa10.34□□□□□ -0.75
SMC3-201ENST00000361804 C2orf78A6NCI8 922 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 TMEM221A6NGB7 291 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 CLDN7O95471 211 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 MT-ND2P03891 347 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 ZNF12P17014 697 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 CORO1AP31146 461 aaKnown RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 MAPKAPK2P49137 400 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 NFE2Q16621 373 aaPredicted RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 LSRQ86X29 649 aaPredicted RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 RNF168Q8IYW5 571 aaPredicted RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 CARNMT1Q8N4J0 409 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 SKA2Q8WVK7 121 aaPredicted RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 NRBF2Q96F24 287 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 TUBA1CQ9BQE3 449 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 HEPHQ9BQS7 1158 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 RNF167Q9H6Y7 350 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 GPN2Q9H9Y4 310 aaPredicted RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 SLCO3A1Q9UIG8 710 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 PPT2Q9UMR5 302 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 ARIH1Q9Y4X5 557 aaPredicted RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 TYW5A2RUC4 315 aaKnown RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 JAK1P23458 1154 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 CLK3P49761 638 aaKnown RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 DAPP51397 102 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 DGKEP52429 567 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 TTC23Q5W5X9 447 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 DOK6Q6PKX4 331 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 NCCRP1Q6ZVX7 275 aaPredicted RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 TSPAN33Q86UF1 283 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 MICU2Q8IYU8 434 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 ARL10Q8N8L6 244 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 HPS1Q92902 700 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 FAM120BQ96EK7 910 aaKnown RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 FAM193BQ96PV7 902 aaPredicted RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 UGT2B28Q9BY64 529 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 ACPTQ9BZG2 426 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 P2RY12Q9H244 342 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 ASB8Q9H765 288 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 KAT8Q9H7Z6 458 aaKnown RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 SIRT5Q9NXA8 310 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 TMEM9Q9P0T7 183 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 PAIP2BQ9ULR5 123 aaKnown RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 ARNTLO00327 626 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 GAPDHSO14556 408 aaPredicted RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 COCHO43405 550 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 ULK1O75385 1050 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 TNFRSF1BP20333 461 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 AKT1P31749 480 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 NKX2-5P52952 324 aaPredicted RBP10.33□□□□□ -0.76
SMC3-201ENST00000361804 NPTX1Q15818 432 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 INAQ16352 499 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 CYP27C1Q4G0S4 372 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 ZNF691Q5VV52 312 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 OR4F3Q6IEY1 312 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 LRTM1Q9HBL6 345 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 GNPTGQ9UJJ9 305 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 DHRS7Q9Y394 339 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 COL4A3Q01955 1670 aa10.33□□□□□ -0.76
SMC3-201ENST00000361804 PDYNP01213 254 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 ZDHHC11BP0C7U3 371 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 GRIK2Q13002 908 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 RUNDC3AQ59EK9 446 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 RBM48Q5RL73 367 aaKnown RBP10.32□□□□□ -0.76
SMC3-201ENST00000361804 CCDC71Q8IV32 467 aaPredicted RBP10.32□□□□□ -0.76
SMC3-201ENST00000361804 ZDHHC21Q8IVQ6 265 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 OR7A2PQ8NGA2 310 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 FOXJ1Q92949 421 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 ULK4Q96C45 1275 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 TNKS2Q9H2K2 1166 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 SERHLQ9NQF3 203 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 DCAF13Q9NV06 445 aaKnown RBP10.32□□□□□ -0.76
SMC3-201ENST00000361804 IL17CQ9P0M4 197 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 FNIP2Q9P278 1114 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 OPTCQ9UBM4 332 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMC3-201ENST00000361804 PCDHGA4Q9Y5G9 962 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 PCDHGA10Q9Y5H3 936 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 MYOFQ9NZM1 2061 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 SOBPA7XYQ1 873 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 ZNF99A8MXY4 864 aaPredicted RBP10.32□□□□□ -0.76
SMC3-201ENST00000361804 CLDN25C9JDP6 229 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 TMEM189-UBE2V1I3L0A0 370 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 KDELR3O43731 214 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 GREM1O60565 184 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 UGT2B11O75310 529 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 MTX2O75431 263 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 OTCP00480 354 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 HOXB8P17481 243 aaPredicted RBP10.32□□□□□ -0.76
SMC3-201ENST00000361804 IGFBP5P24593 272 aa10.32□□□□□ -0.76
SMC3-201ENST00000361804 SEPHS1P49903 392 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms