RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 PDPK1O15530 556 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 HOXB6P17509 224 aaKnown RBP13.55□□□□□ -0.24
CTR9-201ENST00000361367 PRPS1L1P21108 318 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 C5AR1P21730 350 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 ACRV1P26436 265 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 RPL4P36578 427 aaKnown RBP13.55□□□□□ -0.24
CTR9-201ENST00000361367 UGT2B15P54855 530 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 TMIGD1Q6UXZ0 262 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 C1orf52Q8N6N3 182 aaKnown RBP13.55□□□□□ -0.24
CTR9-201ENST00000361367 DNASE1L2Q92874 299 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 WDR92Q96MX6 357 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 DPYSL5Q9BPU6 564 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 GMPPBQ9Y5P6 360 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 NFS1Q9Y697 457 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 U3KQV3 271 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 KLF11O14901 512 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 MATN4O95460 622 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 IL4RP24394 825 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 BLVRAP53004 296 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 TAS2R41P59536 307 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 SUSD1Q6UWL2 747 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 OR10A6Q8NH74 314 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 C10orf82Q8WW14 230 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 RORBQ92753 470 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 MTMR10Q9NXD2 777 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 RAPGEFL1Q9UHV5 662 aa13.55□□□□□ -0.24
CTR9-201ENST00000361367 LAMB1P07942 1786 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 FAM234BA2RU67 622 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 SMAD6O43541 496 aaKnown RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 ALDOAP04075 364 aaKnown RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 LAMP2P13473 410 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 RPL6Q02878 288 aaKnown RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 NEDD8Q15843 81 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 ZNF648Q5T619 568 aaPredicted RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 LUZP2Q86TE4 346 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 TSPAN33Q86UF1 283 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 CAMKVQ8NCB2 501 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 RGMAQ96B86 450 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 TEFMQ96QE5 360 aaKnown RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 TMEM245Q9H330 911 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 LINC01553A4QN01 128 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 TIPRLO75663 272 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 SPINT3P49223 89 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 LARS2Q15031 903 aaKnown RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 RINLQ6ZS11 566 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 CYS1Q717R9 158 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 OR2T34Q8NGX1 318 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 OR2T3Q8NH03 318 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 CMTM7Q96FZ5 175 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 BTBD9Q96Q07 612 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 OR52B2Q96RD2 323 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 RC3H2Q9HBD1 1191 aaKnown RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 BHMG1C9JSJ3 638 aaPredicted RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 STX16-NPEPL1H3BU86 382 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 STX16O14662 325 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 KIAA0355O15063 1070 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 NDUFS4O43181 175 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 CTSOP43234 321 aaPredicted RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 ADAM17P78536 824 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 PCLAFQ15004 111 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 HKDC1Q2TB90 917 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 INAVAQ3KP66 663 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 ISLR2Q6UXK2 745 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 RPS27LQ71UM5 84 aaKnown RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 SLC9B2Q86UD5 537 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 EPHX4Q8IUS5 362 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 PQLC1Q8N2U9 271 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 FAM3CQ92520 227 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 GAL3ST4Q96RP7 486 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 KLHL25Q9H0H3 589 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 PLAGL1Q9UM63 463 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 PCDHB11Q9Y5F2 797 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 WASH4PA8MWX3 477 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 MYL12BO14950 172 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 TYRP1P17643 537 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 PTX3P26022 381 aaPredicted RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 TRNP1Q6NT89 227 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 SLC5A11Q8WWX8 675 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 SPATA6Q9NWH7 488 aaPredicted RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 DNMT3BQ9UBC3 853 aaKnown RBP13.54□□□□□ -0.24
CTR9-201ENST00000361367 DGKBQ9Y6T7 804 aa13.54□□□□□ -0.24
CTR9-201ENST00000361367 TMEM150CB9EJG8 249 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 VEGFDO43915 354 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 DNAJA2O60884 412 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 LILRB3O75022 631 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 EBLN1P0CF75 366 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 ADRB3P13945 408 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 BPIP17213 487 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 TCEAL5Q5H9L2 206 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 ZDHHC14Q8IZN3 488 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 ZNF563Q8TA94 476 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 CD244Q9BZW8 370 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 MUC13Q9H3R2 512 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 ARAP2Q8WZ64 1704 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 A0A1W2PRB8 838 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 UGT2B17O75795 530 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 RGS8P57771 180 aaPredicted RBP13.53□□□□□ -0.24
CTR9-201ENST00000361367 SUZ12Q15022 739 aaKnown RBP13.53□□□□□ -0.24
CTR9-201ENST00000361367 PLEKHM3Q6ZWE6 761 aa13.53□□□□□ -0.24
CTR9-201ENST00000361367 ARHGAP12Q8IWW6 846 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms