RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 MYO1CO00159 1063 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 TNFSF15O95150 251 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ANKRD34CP0C6C1 535 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 TPBGLP0DKB5 382 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 UGT2B7P16662 529 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 LSSP48449 732 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 PNLIPRP1P54315 467 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 FOXM1Q08050 763 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 CSHL1Q14406 222 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 GRB7Q14451 532 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 SF1Q15637 639 aaKnown RBP18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 TMEM164Q5U3C3 297 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 CYB5D1Q6P9G0 228 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 SPESP1Q6UW49 350 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ARHGAP22Q7Z5H3 698 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ADAMTSL2Q86TH1 951 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 FBXO15Q8NCQ5 510 aaPredicted RBP18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 SMPDL3AQ92484 453 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 N4BP2L2Q92802 583 aaPredicted RBP18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ALKBH8Q96BT7 664 aaKnown RBP18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 PDLIM5Q96HC4 596 aaKnown RBP18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 CCDC138Q96M89 665 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 EGFL8Q99944 293 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 SLC12A9Q9BXP2 914 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 UNKQ9C0B0 810 aaKnown RBP18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 VPS11Q9H270 941 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ZNF768Q9H5H4 540 aaKnown RBP18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 SNX15Q9NRS6 342 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 C1GALT1Q9NS00 363 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 SPHK1Q9NYA1 384 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 UTP6Q9NYH9 597 aaKnown RBP18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 PDP2Q9P2J9 529 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ZNF180Q9UJW8 692 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ACOT9Q9Y305 439 aa18.54■□□□□ 0.56
HLA-DRB1-201ENST00000360004 A0A087X1B8 175 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 IQANK1A0A1B0GTG1 560 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 SMIM23A6NLE4 172 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ZBTB11O95625 1053 aaPredicted RBP18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 GUCA1CO95843 209 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 TSPAN12O95859 305 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 S100BP04271 92 aaPredicted RBP18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ENO2P09104 434 aaPredicted RBP18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 OAS2P29728 719 aaKnown RBP18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 MLLT3P42568 568 aaPredicted RBP18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ATP6V0D1P61421 351 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 IFFO1Q0D2I5 559 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ARHGAP19Q14CB8 494 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 TMEM207Q6UWW9 146 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 CCDC91Q7Z6B0 441 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 TRIM73Q86UV7 250 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 KMT5CQ86Y97 462 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 CARFQ8N187 725 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 SPATA6LQ8N4H0 392 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 LMNTD1Q8N9Z9 388 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ANKRD49Q8WVL7 239 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 DERL2Q9GZP9 239 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 KLHL25Q9H0H3 589 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 INTS7Q9NVH2 962 aaKnown RBP18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 SLC39A1Q9NY26 324 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 PSMC3IPQ9P2W1 217 aaPredicted RBP18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 PDE10AQ9Y233 779 aa18.53■□□□□ 0.56
HLA-DRB1-201ENST00000360004 IGHV5-51A0A0C4DH38 117 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 A0A0J9YY10 115 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 SLC9B1P1A6NJY1 282 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 TRIM49D1C9J1S8 452 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 CDC7O00311 574 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 SLC16A8O95907 504 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 SNRPAP09012 282 aaKnown RBP18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ITIH1P19827 911 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 AP1S2P56377 157 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 HSD11B2P80365 405 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 CYP4F3Q08477 520 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 CAMK2BQ13554 666 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ZKSCAN8Q15776 578 aaPredicted RBP18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 CYP2A13Q16696 494 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 KLC3Q6P597 504 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 LINC01555Q8NAE3 123 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 DCAKDQ8WVC6 231 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ATL1Q8WXF7 558 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 ANKRD7Q92527 254 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 MED8Q96G25 268 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 CCDC86Q9H6F5 360 aaKnown RBP18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 FANCEQ9HB96 536 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 NMRAL1Q9HBL8 299 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 PDE7BQ9NP56 450 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 THSD1Q9NS62 852 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 WDR70Q9NW82 654 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 OCIAD1Q9NX40 245 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 PCDHB11Q9Y5F2 797 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 PCDHGA8Q9Y5G5 932 aa18.52■□□□□ 0.56
HLA-DRB1-201ENST00000360004 NCOR2Q9Y618 2525 aa18.52■□□□□ 0.55
HLA-DRB1-201ENST00000360004 A0A096LPK6 155 aa18.51■□□□□ 0.55
HLA-DRB1-201ENST00000360004 BRINP1O60477 761 aa18.51■□□□□ 0.55
HLA-DRB1-201ENST00000360004 CCNDBP1O95273 360 aa18.51■□□□□ 0.55
HLA-DRB1-201ENST00000360004 LTA4HP09960 611 aaKnown RBP18.51■□□□□ 0.55
HLA-DRB1-201ENST00000360004 CCL4P13236 92 aa18.51■□□□□ 0.55
HLA-DRB1-201ENST00000360004 PVRP15151 417 aa18.51■□□□□ 0.55
HLA-DRB1-201ENST00000360004 CMPK1P30085 196 aa18.51■□□□□ 0.55
HLA-DRB1-201ENST00000360004 HSD17B3P37058 310 aa18.51■□□□□ 0.55
HLA-DRB1-201ENST00000360004 RAB15P59190 212 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms