RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ZBED6CLQ96FA7 236 aaPredicted RBP18.03■□□□□ 0.48
SHANK1-202ENST00000359082 SQORQ9Y6N5 450 aa18.03■□□□□ 0.48
SHANK1-202ENST00000359082 LYPLA2O95372 231 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 ITIH1P19827 911 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 EDNRAP25101 427 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 HSD11B1P28845 292 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 OR3A3P47888 321 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 OR3A2P47893 321 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 C4orf46Q504U0 113 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 ABHD13Q7L211 337 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 PROKR2Q8NFJ6 384 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 HNRNPABQ99729 332 aaKnown RBP18.02■□□□□ 0.48
SHANK1-202ENST00000359082 SMURF2Q9HAU4 748 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 SLC17A6Q9P2U8 582 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 SLITRK4Q8IW52 837 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 NXPE1Q8N323 547 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 KLHL36Q8N4N3 616 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 B4DGG1 531 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 NSG1P42857 185 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 XKP51811 444 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 DCDC1P59894 354 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 ADGRE1Q14246 886 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 LIN52Q52LA3 116 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 C1orf216Q8TAB5 229 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 HMGXB4Q9UGU5 601 aa18.02■□□□□ 0.48
SHANK1-202ENST00000359082 RUVBL1Q9Y265 456 aaKnown RBP18.02■□□□□ 0.48
SHANK1-202ENST00000359082 SMAD9O15198 467 aaKnown RBP18.02■□□□□ 0.47
SHANK1-202ENST00000359082 RAP2AP10114 183 aa18.02■□□□□ 0.47
SHANK1-202ENST00000359082 UGT1A3P35503 534 aa18.02■□□□□ 0.47
SHANK1-202ENST00000359082 PRKCDQ05655 676 aa18.02■□□□□ 0.47
SHANK1-202ENST00000359082 ZNF280BQ86YH2 543 aa18.02■□□□□ 0.47
SHANK1-202ENST00000359082 DPYSL5Q9BPU6 564 aa18.02■□□□□ 0.47
SHANK1-202ENST00000359082 PAK6Q9NQU5 681 aaPredicted RBP18.02■□□□□ 0.47
SHANK1-202ENST00000359082 GDAP2Q9NXN4 497 aa18.02■□□□□ 0.47
SHANK1-202ENST00000359082 CRISP3P54108 245 aa18.02■□□□□ 0.47
SHANK1-202ENST00000359082 UBXN2BQ14CS0 331 aa18.02■□□□□ 0.47
SHANK1-202ENST00000359082 LACTB2Q53H82 288 aaPredicted RBP18.02■□□□□ 0.47
SHANK1-202ENST00000359082 SUN5Q8TC36 379 aa18.02■□□□□ 0.47
SHANK1-202ENST00000359082 AIFM2Q9BRQ8 373 aa18.02■□□□□ 0.47
SHANK1-202ENST00000359082 L7N2F9 121 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 INMTO95050 263 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 PTX3P26022 381 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-202ENST00000359082 GBX2P52951 348 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-202ENST00000359082 VAMP2P63027 116 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 GPR68Q15743 365 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 NAXEQ8NCW5 288 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 CNTN6Q9UQ52 1028 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 COL3A1P02461 1466 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-202ENST00000359082 MYBPHLA2RUH7 354 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 H3BSH0 61 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 ESR1P03372 595 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 ZNF3P17036 446 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 GDI2P50395 445 aaKnown RBP18.01■□□□□ 0.47
SHANK1-202ENST00000359082 LRRC32Q14392 662 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 ARSIQ5FYB1 569 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 ENPP7Q6UWV6 458 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 TFAP2BQ92481 460 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 POLMQ9NP87 494 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-202ENST00000359082 A0A1W2PRB8 838 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 OR51F1A6NGY5 319 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 SMPD1P17405 629 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 CCNFP41002 786 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 IQCCQ4KMZ1 466 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 SH3PXD2AQ5TCZ1 1133 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 SLC6A15Q9H2J7 730 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 KAT8Q9H7Z6 458 aaKnown RBP18.01■□□□□ 0.47
SHANK1-202ENST00000359082 ZNF726A6NNF4 738 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 PLGLB1Q02325 96 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 TIGD6Q17RP2 521 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 TATDN1Q6P1N9 297 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 RASGRP3Q8IV61 690 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 SLC35A5Q9BS91 424 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 NIFKQ9BYG3 293 aaKnown RBP18.01■□□□□ 0.47
SHANK1-202ENST00000359082 PCDHGA12O60330 932 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 RLN2P04090 185 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 RB1P06400 928 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 ZNF806P0C7X5 589 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 TIE1P35590 1138 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 NRG3P56975 720 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 BTN3A2P78410 334 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 CADM1Q9BY67 442 aaKnown RBP18.01■□□□□ 0.47
SHANK1-202ENST00000359082 PCDHGA11Q9Y5H2 935 aa18.01■□□□□ 0.47
SHANK1-202ENST00000359082 SPIN1Q9Y657 262 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-202ENST00000359082 TGFB1P01137 390 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 ACSL1P33121 698 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 CCR8P51685 355 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 SLC10A7Q0GE19 358 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 NFATC2Q13469 925 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 KHDC1Q4VXA5 237 aaKnown RBP18■□□□□ 0.47
SHANK1-202ENST00000359082 ASB18Q6ZVZ8 466 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 P4HA3Q7Z4N8 544 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 DGAT2Q96PD7 388 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 GATA5Q9BWX5 397 aaPredicted RBP18■□□□□ 0.47
SHANK1-202ENST00000359082 CD2P06729 351 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 CXCR1P25024 350 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 HGSNATQ68CP4 663 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 OVCA2Q8WZ82 227 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 KHNYNO15037 678 aaKnown RBP18■□□□□ 0.47
SHANK1-202ENST00000359082 CLPXO76031 633 aa18■□□□□ 0.47
SHANK1-202ENST00000359082 ATF4P18848 351 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms