RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 KCNH6Q9H252 994 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 SLC32A1Q9H598 525 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 MAGIXQ9H6Y5 334 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 RMND5AQ9H871 391 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 SERHLQ9NQF3 203 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 EXD2Q9NVH0 621 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 DNAAF2Q9NVR5 837 aaKnown RBP8.38□□□□□ -1.07
RFX3-202ENST00000358730 TDRKHQ9Y2W6 561 aaKnown RBP8.38□□□□□ -1.07
RFX3-202ENST00000358730 ORC6Q9Y5N6 252 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 NUP214P35658 2090 aaPredicted RBP8.38□□□□□ -1.07
RFX3-202ENST00000358730 PLXNB3Q9ULL4 1909 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 A0A096LPI6 279 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 LOC100130705A0A1B0GUX0 176 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 PER2O15055 1255 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 GREM1O60565 184 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 OBSL1O75147 1896 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 RECQL5O94762 991 aaPredicted RBP8.38□□□□□ -1.07
RFX3-202ENST00000358730 LRATO95237 230 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 ALDH1A1P00352 501 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 HTR1AP08908 422 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 NEK2P51955 445 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 C21orf59P57076 290 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 GABARAPL2P60520 117 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 PGS1Q32NB8 556 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 LRIF1Q5T3J3 769 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 LHX8Q68G74 356 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 Q6ZNB5 142 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 UBE2R2Q712K3 238 aaPredicted RBP8.38□□□□□ -1.07
RFX3-202ENST00000358730 ITCHQ96J02 903 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 LMCD1Q9NZU5 365 aa8.38□□□□□ -1.07
RFX3-202ENST00000358730 PABPN1LA6NDY0 278 aaKnown RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 SLC1A7O00341 560 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CBSLP0DN79 551 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 SDC1P18827 310 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 TACR1P25103 407 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CBSP35520 551 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CDKN2CP42773 168 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 PPP3CCP48454 512 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CLDN8P56748 225 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 HSPA14Q0VDF9 509 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 SPIDRQ14159 915 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 TPGS2Q68CL5 300 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 LRRC66Q68CR7 880 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CES5AQ6NT32 575 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 C16orf87Q6PH81 154 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 Q6ZNX1 250 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CALHM3Q86XJ0 350 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 RNF168Q8IYW5 571 aaPredicted RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 ARL10Q8N8L6 244 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 NAT16Q8N8M0 369 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 DNAJB8Q8NHS0 232 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 GIPC3Q8TF64 312 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 FRS2Q8WU20 508 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 PYCR2Q96C36 320 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 REXO5Q96IC2 774 aaKnown RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 COPS8Q99627 209 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CCDC90BQ9GZT6 254 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 ZNF334Q9HCZ1 680 aaPredicted RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 FAIMQ9NVQ4 179 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 ZDHHC3Q9NYG2 299 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CLEC4EQ9ULY5 219 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 PPT2Q9UMR5 302 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 SNX6Q9UNH7 406 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 MAN2B2Q9Y2E5 1009 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 SNX5Q9Y5X3 404 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 PTGES3LE9PB15 166 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 GFRA2O00451 464 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 BCKDKO14874 412 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 ZBTB11O95625 1053 aaPredicted RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 ZNF682O95780 498 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 EFEMP2O95967 443 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 INHAP05111 366 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 INHBBP09529 407 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 PRPS2P11908 318 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 PFKLP17858 780 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CCR7P32248 378 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 RAD23AP54725 363 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 LMAN2Q12907 356 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 ATP13A5Q4VNC0 1218 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 SPOUT1Q5T280 376 aaKnown RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 ZNF691Q5VV52 312 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 GTF2IRD2BQ6EKJ0 949 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CRTC1Q6UUV9 634 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 LRRC70Q7Z2Q7 622 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 GALNT5Q7Z7M9 940 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 ZNF554Q86TJ5 538 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 GTF2IRD2Q86UP8 949 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 PLPP6Q8IY26 295 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CBARPQ8N350 705 aaPredicted RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 OR2AP1Q8NGE2 309 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 CD99L2Q8TCZ2 262 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 PYURFQ96I23 114 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 PLEKHA8Q96JA3 519 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 C19orf43Q9BQ61 176 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 GPRC5BQ9NZH0 403 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 LSM7Q9UK45 103 aaKnown RBP8.37□□□□□ -1.07
RFX3-202ENST00000358730 BAG5Q9UL15 447 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 PSME2Q9UL46 239 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 KRT87PA6NCN2 255 aa8.37□□□□□ -1.07
RFX3-202ENST00000358730 J3QRK9 145 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms