RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 E7ENX8 843 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 ENTPD6O75354 484 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 GJB1P08034 283 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 HADHBP55084 474 aaKnown RBP6.34□□□□□ -1.39
UPF2-201ENST00000356352 CA9Q16790 459 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 FBXO43Q4G163 708 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 RBM20Q5T481 1227 aaKnown RBP6.34□□□□□ -1.39
UPF2-201ENST00000356352 PRAMEF17Q5VTA0 474 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 C1orf189Q5VU69 101 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 CLEC6AQ6EIG7 209 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 LINGO4Q6UY18 593 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 C12orf40Q86WS4 652 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 IFNL1Q8IU54 200 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 CBR4Q8N4T8 237 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 GEMIN6Q8WXD5 167 aaKnown RBP6.34□□□□□ -1.39
UPF2-201ENST00000356352 CEP295NLQ96MC4 621 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 TBC1D17Q9HA65 648 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 ERVK-5Q9HDB9 667 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 CD320Q9NPF0 282 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 POFUT2Q9Y2G5 429 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 R3HDM2Q9Y2K5 976 aaKnown RBP6.34□□□□□ -1.39
UPF2-201ENST00000356352 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.34□□□□□ -1.39
UPF2-201ENST00000356352 OR2AT4A6NND4 320 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 NPIPA5E9PKD4 350 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 SCDO00767 359 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 C8AP07357 584 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 RYKP34925 604 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 IDH3AP50213 366 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 JAM2P57087 298 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 DSTNP60981 165 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 RPL26P61254 145 aaKnown RBP6.34□□□□□ -1.39
UPF2-201ENST00000356352 HERVK_113P63132 956 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 ENPP2Q13822 863 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 PDGFRLQ15198 375 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 OCLNQ16625 522 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 HSDL1Q3SXM5 330 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 FSTL4Q6MZW2 842 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 BRAT1Q6PJG6 821 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 DGLUCYQ7Z3D6 616 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 NANOGNBQ7Z5D8 188 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 SATL1Q86VE3 508 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 GKN2Q86XP6 184 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 PACRGLQ8N7B6 248 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 SPERTQ8NA61 448 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 PROKR2Q8NFJ6 384 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 OR8H1Q8NGG4 311 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 OR10A6Q8NH74 314 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 PMEPA1Q969W9 287 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 PWWP2AQ96N64 755 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 FCRL5Q96RD9 977 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 TUBGCP5Q96RT8 1024 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 DPYSL5Q9BPU6 564 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 CCM2Q9BSQ5 444 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 ERVK-6Q9BXR3 956 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 ZNF717Q9BY31 904 aaPredicted RBP6.34□□□□□ -1.39
UPF2-201ENST00000356352 LRRC3Q9BY71 257 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 SLC22A4Q9H015 551 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 ENY2Q9NPA8 101 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 ZNF224Q9NZL3 707 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 MKLN1Q9UL63 735 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 NPIPA1Q9UND3 350 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 PCDHGB6Q9Y5F9 930 aa6.34□□□□□ -1.39
UPF2-201ENST00000356352 TRBV23OR9-2A0A075B6M9 112 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 EDDM13A0A1B0GTR0 161 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 CAPN8A6NHC0 703 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 C2CD4BA6NLJ0 364 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 AQP12BA6NM10 295 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 CPSF4LA6NMK7 179 aaKnown RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 SLC22A1O15245 554 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 OR7A10O76100 309 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ZNF30P17039 623 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 MAPK3P27361 379 aaPredicted RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 NMBRP28336 390 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 XKP51811 444 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 GBE1Q04446 702 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 BNIP1Q12981 228 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 SP140Q13342 867 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 C6orf52Q5T4I8 152 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ZNF613Q6PF04 617 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PAOXQ6QHF9 649 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 LRRC69Q6ZNQ3 347 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 CEP97Q8IW35 865 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 AQP12AQ8IXF9 295 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 C7orf61Q8IZ16 206 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ARL14EPQ8N8R7 260 aaPredicted RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 C1orf127Q8N9H9 656 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 OR7D4Q8NG98 312 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 CEP76Q8TAP6 659 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 LRRN4Q8WUT4 740 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 NAT14Q8WUY8 206 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PIWIL1Q96J94 861 aaKnown RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 KCTD7Q96MP8 289 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 COPS4Q9BT78 406 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 MND1Q9BWT6 205 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ASPNQ9BXN1 380 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 POLR2J3Q9H1A7 115 aaKnown RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 GOLGA2P5Q9HBQ8 144 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 TVP23BQ9NYZ1 205 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 A0A1W2PRQ8 180 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 TTC34A8MYJ7 566 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms