RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 ERVMER34-1Q9H9K5 563 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 MEAF6Q9HAF1 191 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 ZFYVE1Q9HBF4 777 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 KLHL42Q9P2K6 505 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 TRMT6Q9UJA5 497 aaKnown RBP8.04□□□□□ -1.12
CD44-205ENST00000352818 TUBD1Q9UJT1 453 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 CLEC4EQ9ULY5 219 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 PLXNA2O75051 1894 aa8.04□□□□□ -1.12
CD44-205ENST00000352818 TSPAN11A1L157 253 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 E9PBE3 544 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 K7ERQ8 282 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 TLR4O00206 839 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 CCNT2O60583 730 aaKnown RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 KLHL41O60662 606 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 PRAMEF1O95521 474 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 POP4O95707 220 aaKnown RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 PRSS56P0CW18 603 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 THRAP10827 490 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 EZRP15311 586 aaKnown RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 ZNF7P17097 686 aaPredicted RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 GM2AP17900 193 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 NCF2P19878 526 aaPredicted RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 ACRV1P26436 265 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 PIK3R1P27986 724 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 CD38P28907 300 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 FMO4P31512 558 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 SPAM1P38567 509 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 MLLT3P42568 568 aaPredicted RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 KCNC1P48547 511 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 CCNG1P51959 295 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 IL2P60568 153 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 RPS14P62263 151 aaKnown RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 DAB2P98082 770 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 ECT2LQ008S8 904 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 NFATC2Q13469 925 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 ZNF234Q14588 700 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 MYLK3Q32MK0 819 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 UNC50Q53HI1 259 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 CARD16Q5EG05 197 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 SWT1Q5T5J6 900 aaKnown RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 WLSQ5T9L3 541 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 BORAQ6PGQ7 559 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 USP45Q70EL2 814 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 NET1Q7Z628 596 aaPredicted RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 SCUBE1Q8IWY4 988 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 HOMEZQ8IX15 550 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 ULK2Q8IYT8 1036 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 RBFAQ8N0V3 343 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 AHI1Q8N157 1196 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 ARL14Q8N4G2 192 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 PTGR2Q8N8N7 351 aaPredicted RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 OR4C6Q8NH72 309 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 CEP70Q8NHQ1 597 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 GIMAP7Q8NHV1 300 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 RP9Q8TA86 221 aaKnown RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 DTX3LQ8TDB6 740 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 WFIKKN2Q8TEU8 576 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 SORCS1Q8WY21 1168 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 ARRDC3Q96B67 414 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 MOCOSQ96EN8 888 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 SCRN2Q96FV2 425 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 ANKRD27Q96NW4 1050 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 SMIM14Q96QK8 99 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 NUF2Q9BZD4 464 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 UNKQ9C0B0 810 aaKnown RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 BTBD1Q9H0C5 482 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 DCLRE1BQ9H816 532 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 CYP4F12Q9HCS2 524 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 NDE1Q9NXR1 346 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 PLK2Q9NYY3 685 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 NUDT4Q9NZJ9 180 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 NOP53Q9NZM5 478 aaKnown RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 NFKBIL1Q9UBC1 381 aaPredicted RBP8.03□□□□□ -1.12
CD44-205ENST00000352818 SERGEFQ9UGK8 458 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 GNPTGQ9UJJ9 305 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 RNF112Q9ULX5 631 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 DHRS7Q9Y394 339 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 PCDHGA7Q9Y5G6 932 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 STAB1Q9NY15 2570 aa8.03□□□□□ -1.12
CD44-205ENST00000352818 TP53BP1Q12888 1972 aaPredicted RBP8.02□□□□□ -1.12
CD44-205ENST00000352818 CKAP5Q14008 2032 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 C1orf232A0A0U1RR37 186 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 RGSL1A5PLK6 1076 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 UBXN8O00124 270 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 EIF3FO00303 357 aaPredicted RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 SYNCRIPO60506 623 aaKnown RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 NIPSNAP2O75323 286 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 CIB2O75838 187 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 DDAH2O95865 285 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 JUNP05412 331 aaKnown RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 GP1BAP07359 652 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 ALPIP09923 528 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 COX4I1P13073 169 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 ZNF30P17039 623 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 BPIP17213 487 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 CTPS1P17812 591 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 EPHA3P29320 983 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 GCKP35557 465 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 CPA2P48052 419 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 MRPL19P49406 292 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms