RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 C5AR1P21730 350 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 EMX2Q04743 252 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 SMU1Q2TAY7 513 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 STK32CQ86UX6 486 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 PIM3Q86V86 326 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 MICU2Q8IYU8 434 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 ARRDC2Q8TBH0 407 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 ARMC5Q96C12 935 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 MTERF3Q96E29 417 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 RMND5BQ96G75 393 aaPredicted RBP11.89□□□□□ -0.51
SMAD9-201ENST00000350148 ATPIF1Q9UII2 106 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 ZDHHC2Q9UIJ5 367 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 C3orf18Q9UK00 162 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 RFPL2O75678 378 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 CA3P07451 260 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 CDH3P22223 829 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 MANEALQ5VSG8 457 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 FRG2Q64ET8 278 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 KIAA1161Q6NSJ0 714 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 MACC1Q6ZN28 852 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 LIX1Q8N485 282 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 SLC13A3Q8WWT9 602 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 FRG2BQ96QU4 278 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 TBCDQ9BTW9 1192 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 ABCG8Q9H221 673 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 PIF1Q9H611 641 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 IL17CQ9P0M4 197 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 ZNF282Q9UDV7 671 aaPredicted RBP11.89□□□□□ -0.51
SMAD9-201ENST00000350148 MYRFQ9Y2G1 1151 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 ADAM12O43184 909 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 SNNO75324 88 aaPredicted RBP11.89□□□□□ -0.51
SMAD9-201ENST00000350148 SPINT3P49223 89 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 TMEM115Q12893 351 aaPredicted RBP11.89□□□□□ -0.51
SMAD9-201ENST00000350148 FAM92BQ6ZTR7 304 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 RASSF5Q8WWW0 418 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 TSSK3Q96PN8 268 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 OSER1Q9NX31 292 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 NEMP2A6NFY4 417 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.89□□□□□ -0.51
SMAD9-201ENST00000350148 TTKP33981 857 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 PIK3CBP42338 1070 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 MAGEA8P43361 318 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 ACADVLP49748 655 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 MPP2Q14168 576 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 KHDC1Q4VXA5 237 aaKnown RBP11.89□□□□□ -0.51
SMAD9-201ENST00000350148 PRAMEF14Q5SWL7 426 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 PRAMEF13Q5VWM6 474 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 LIPJQ5W064 366 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 TMEM25Q86YD3 366 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 ZCCHC7Q8N3Z6 543 aaKnown RBP11.89□□□□□ -0.51
SMAD9-201ENST00000350148 SHKBP1Q8TBC3 707 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 LINC01599Q8WXQ3 324 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 C12orf66Q96MD2 445 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 EBF4Q9BQW3 602 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 CHID1Q9BWS9 393 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 SLC46A2Q9BY10 475 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 TMEM245Q9H330 911 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 EXD2Q9NVH0 621 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 TAS2R1Q9NYW7 299 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 SLC9A8Q9Y2E8 581 aa11.89□□□□□ -0.51
SMAD9-201ENST00000350148 ELOVL7A1L3X0 281 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 PRMT3O60678 531 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 RASGRP1O95267 797 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 TNFP01375 233 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 SLC35G6P0C7Q6 338 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 EPCAMP16422 314 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 CTGFP29279 349 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 BUD31P41223 144 aaPredicted RBP11.88□□□□□ -0.51
SMAD9-201ENST00000350148 FOXD4Q12950 439 aaPredicted RBP11.88□□□□□ -0.51
SMAD9-201ENST00000350148 MBTPS1Q14703 1052 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 TLDC1Q6P9B6 456 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 PLD6Q8N2A8 252 aaKnown RBP11.88□□□□□ -0.51
SMAD9-201ENST00000350148 TMIEQ8NEW7 156 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 OR9A1PQ8NGU1 263 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 PHF21AQ96BD5 680 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 CMTM7Q96FZ5 175 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 DENND2DQ9H6A0 471 aaPredicted RBP11.88□□□□□ -0.51
SMAD9-201ENST00000350148 VPS29Q9UBQ0 182 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 AQP12BA6NM10 295 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 MANBAO00462 879 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 MMP20O60882 483 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 CNOT3O75175 753 aaKnown RBP11.88□□□□□ -0.51
SMAD9-201ENST00000350148 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 SLC6A2P23975 617 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 C2orf80Q0P641 193 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 NADSYN1Q6IA69 706 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 AQP12AQ8IXF9 295 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 LPGAT1Q92604 370 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 TPD52L3Q96J77 140 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 CLPTM1LQ96KA5 538 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 GSDMCQ9BYG8 508 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 AKTIPQ9H8T0 292 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 PLGRKTQ9HBL7 147 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 ZNF334Q9HCZ1 680 aaPredicted RBP11.88□□□□□ -0.51
SMAD9-201ENST00000350148 SOHLH2Q9NX45 425 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 WBP1LQ9NX94 342 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 SPATA2Q9UM82 520 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 GNB5O14775 395 aa11.88□□□□□ -0.51
SMAD9-201ENST00000350148 PTX3P26022 381 aaPredicted RBP11.88□□□□□ -0.51
SMAD9-201ENST00000350148 STK19P49842 368 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms