RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 L3MBTL4Q8NA19 623 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 OR5K2Q8NHB8 316 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 ZNF480Q8WV37 535 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 TRIT1Q9H3H1 467 aaKnown RBP18.14■□□□□ 0.49
PTN-201ENST00000348225 MRPL40Q9NQ50 206 aaKnown RBP18.14■□□□□ 0.49
PTN-201ENST00000348225 GPRC5BQ9NZH0 403 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 KLQ9UEF7 1012 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 SNX6Q9UNH7 406 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 KCNK6Q9Y257 313 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 CA5BQ9Y2D0 317 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 B2RBV5 119 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 H0Y8X5 98 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 SLC28A1O00337 649 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 STK25O00506 426 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 TNFRSF10CO14798 259 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 CLGNO14967 610 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 ULK1O75385 1050 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 PRR35P0CG20 571 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 COX4I1P13073 169 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 HSD17B2P37059 387 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 HALP42357 657 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 RABIFP47224 123 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 HTR6P50406 440 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 MXRA7P84157 204 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 MAPRE2Q15555 327 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 ZRSR2Q15696 482 aaKnown RBP18.13■□□□□ 0.49
PTN-201ENST00000348225 GSTA3Q16772 222 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 ATP6AP1LQ52LC2 224 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 CAPRIN2Q6IMN6 1127 aaKnown RBP18.13■□□□□ 0.49
PTN-201ENST00000348225 SCIMPQ6UWF3 145 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 SPEM1Q8N4L4 309 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 TMEM145Q8NBT3 493 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 OR5AR1Q8NGP9 310 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 RP9Q8TA86 221 aaKnown RBP18.13■□□□□ 0.49
PTN-201ENST00000348225 GPR174Q9BXC1 333 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 CHRDQ9H2X0 955 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 CIDEBQ9UHD4 219 aa18.13■□□□□ 0.49
PTN-201ENST00000348225 ZNF839A8K0R7 811 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 FFAR3O14843 346 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 GPR42O15529 346 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 RGS14O43566 566 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 CCND1P24385 295 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 RPL10P27635 214 aaKnown RBP18.12■□□□□ 0.49
PTN-201ENST00000348225 PNLIPRP1P54315 467 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 TBPL1P62380 186 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 KCNJ2P63252 427 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 IRF8Q02556 426 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 GRB7Q14451 532 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 LIPJQ5W064 366 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 TBC1D21Q8IYX1 336 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 GJD3Q8N144 294 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 RAB42Q8N4Z0 105 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 POU5F2Q8N7G0 328 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 PJA1Q8NG27 643 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 TPSD1Q9BZJ3 242 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 C1orf21Q9H246 121 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 INTS7Q9NVH2 962 aaKnown RBP18.12■□□□□ 0.49
PTN-201ENST00000348225 KCNE2Q9Y6J6 123 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 IGHV1OR15-9A0A0B4J2B8 117 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 PRR19A6NJB7 356 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 PSMD12O00232 456 aaPredicted RBP18.12■□□□□ 0.49
PTN-201ENST00000348225 MANBAO00462 879 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 PEX11AO75192 247 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 ALDOCP09972 364 aaKnown RBP18.12■□□□□ 0.49
PTN-201ENST00000348225 IDO1P14902 403 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 GNAZP19086 355 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 ERVK-8P63133 956 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 CHIT1Q13231 466 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 CYLC2Q14093 348 aaPredicted RBP18.12■□□□□ 0.49
PTN-201ENST00000348225 LRP8Q14114 963 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 ARHGAP19Q14CB8 494 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 ABRAXAS2Q15018 415 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 CPSF6Q16630 551 aaKnown RBP eCLIP18.12■□□□□ 0.49
PTN-201ENST00000348225 KIF19Q2TAC6 998 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 DNAL1Q4LDG9 190 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 RINLQ6ZS11 566 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 ABI3BPQ7Z7G0 1075 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 PPFIBP2Q8ND30 876 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 PHC3Q8NDX5 983 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 OR2T11Q8NH01 316 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 OR1E3Q8WZA6 343 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 USP7Q93009 1102 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 CLDN23Q96B33 292 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 BIRC7Q96CA5 298 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 PDXPQ96GD0 296 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 PPP3R2Q96LZ3 170 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 C12orf66Q96MD2 445 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 MIPEPQ99797 713 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 TBC1D10AQ9BXI6 508 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 ELOVL6Q9H5J4 265 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 EBF2Q9HAK2 575 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 CCDC177Q9NQR7 707 aaPredicted RBP18.12■□□□□ 0.49
PTN-201ENST00000348225 TAS2R1Q9NYW7 299 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 SPATA7Q9P0W8 599 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 ZNF490Q9ULM2 529 aaPredicted RBP18.12■□□□□ 0.49
PTN-201ENST00000348225 TDRKHQ9Y2W6 561 aaKnown RBP18.12■□□□□ 0.49
PTN-201ENST00000348225 DYRK1BQ9Y463 629 aa18.12■□□□□ 0.49
PTN-201ENST00000348225 KCNE1BA0A087WTH5 132 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 LOC100653049A0A140TA62 436 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 PDZK1P1A8MUH7 402 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms