RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 ZNF419Q96HQ0 510 aaPredicted RBP15.52■□□□□ 0.08
HMGA1-202ENST00000347617 NACA2Q9H009 215 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 SIK2Q9H0K1 926 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 DCSTAMPQ9H295 470 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 ATXN3LQ9H3M9 355 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 CATSPERZQ9NTU4 200 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 DCAF13Q9NV06 445 aaKnown RBP15.52■□□□□ 0.08
HMGA1-202ENST00000347617 MARCH2Q9P0N8 246 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 RAPGEFL1Q9UHV5 662 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 MKLN1Q9UL63 735 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 VPS9D1Q9Y2B5 631 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 GRIP1Q9Y3R0 1128 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 TIMM22Q9Y584 194 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 OR2A25A4D2G3 310 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 E9PAM4 449 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 HAT1O14929 419 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 ADAM12O43184 909 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 MED26O95402 600 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 FGF1P05230 155 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 RHOQP17081 205 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 HLA-DPA1P20036 260 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 RCVRNP35243 200 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 CYP20A1Q6UW02 462 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 ENPP6Q6UWR7 440 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 RNF165Q6ZSG1 346 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 ZNF683Q8IZ20 524 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 UMODL1-AS1Q8N2C9 162 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 ITPAQ9BY32 194 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 PIF1Q9H611 641 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 CRYL1Q9Y2S2 319 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 PEX16Q9Y5Y5 336 aa15.52■□□□□ 0.07
HMGA1-202ENST00000347617 LOC285095A0A1B0GVY8 99 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 DRGXA6NNA5 263 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 LOC110117498-PIK3R3F6TDL0 507 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 LDB2O43679 373 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 RHOBTB1O94844 696 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 KCNK2O95069 426 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 MT-ND2P03891 347 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 S100BP04271 92 aaPredicted RBP15.51■□□□□ 0.07
HMGA1-202ENST00000347617 CD36P16671 472 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 CD6P30203 668 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 BMPR1AP36894 532 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 ETV6P41212 452 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 CLK1P49759 484 aaKnown RBP15.51■□□□□ 0.07
HMGA1-202ENST00000347617 ARSDP51689 593 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 NCS1P62166 190 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 DEFB103AP81534 67 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 EFEMP1Q12805 493 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 RAPSNQ13702 412 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 C10orf120Q5SQS8 335 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 CATSPEREQ5SY80 951 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 AGAP6Q5VW22 663 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 RSBN1Q5VWQ0 802 aaPredicted RBP15.51■□□□□ 0.07
HMGA1-202ENST00000347617 STEAP3Q658P3 488 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 TSPYL5Q86VY4 417 aaPredicted RBP15.51■□□□□ 0.07
HMGA1-202ENST00000347617 SIMC1Q8NDZ2 872 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 PIK3R3Q92569 461 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 HTRA1Q92743 480 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 RHBDF1Q96CC6 855 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 PPP3R2Q96LZ3 170 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 AGAP4Q96P64 663 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 PRDM5Q9NQX1 630 aaPredicted RBP15.51■□□□□ 0.07
HMGA1-202ENST00000347617 OPTCQ9UBM4 332 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 ZNF221Q9UK13 617 aa15.51■□□□□ 0.07
HMGA1-202ENST00000347617 MRPL42Q9Y6G3 142 aaKnown RBP15.51■□□□□ 0.07
HMGA1-202ENST00000347617 TNFRSF10AO00220 468 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 KMOO15229 486 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 SCO2O43819 266 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 FAM20BO75063 409 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 CCNKO75909 580 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 GOT2P00505 430 aaKnown RBP15.5■□□□□ 0.07
HMGA1-202ENST00000347617 EPOP01588 193 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 URODP06132 367 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 ATP5C1P36542 298 aaKnown RBP15.5■□□□□ 0.07
HMGA1-202ENST00000347617 TGFBR2P37173 567 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 MAGEA2P43356 314 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 STC1P52823 247 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 NKG7Q16617 165 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 C5orf22Q49AR2 442 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 MS4A13Q5J8X5 152 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 SIRPB2Q5JXA9 342 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 PIK3R6Q5UE93 754 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 MARC1Q5VT66 337 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 TAS2R42Q7RTR8 314 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 SNX29P2Q8IUI4 249 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 TCEAL8Q8IYN2 117 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 TEX26Q8N6G2 289 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 OR2T11Q8NH01 316 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 OR4L1Q8NH43 312 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 CNIH3Q8TBE1 160 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 SLC13A3Q8WWT9 602 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 TRIM63Q969Q1 353 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 ZYG11BQ9C0D3 744 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 CARS2Q9HA77 564 aaKnown RBP15.5■□□□□ 0.07
HMGA1-202ENST00000347617 TMEM248Q9NWD8 314 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 DNMT3LQ9UJW3 386 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 PCDHB14Q9Y5E9 798 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 ANKRD12Q6UB98 2062 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 BRCA2P51587 3418 aa15.5■□□□□ 0.07
HMGA1-202ENST00000347617 ANKRD28O15084 1053 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms