RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PIWIL1Q96J94 861 aaKnown RBP19.01■□□□□ 0.63
HDAC4-201ENST00000345617 PDCD2LQ9BRP1 358 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 NEUROD4Q9HD90 331 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 GPSM3Q9Y4H4 160 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 AOC1P19801 751 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 LRRN1Q6UXK5 716 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 OR6K6Q8NGW6 343 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 SLCO2A1Q92959 643 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 ACO2Q99798 780 aaKnown RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 TM9SF2Q99805 663 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 TLR6Q9Y2C9 796 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 TTLL8A6PVC2 850 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 ATP5A1P25705 553 aaKnown RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 PURBQ96QR8 312 aaKnown RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 IL1R1P14778 569 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 ART5Q96L15 291 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 COL21A1Q96P44 957 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 MAPKAP1Q9BPZ7 522 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 RGCCQ9H4X1 137 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 RNF6Q9Y252 685 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 SPIN1Q9Y657 262 aaPredicted RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 H3BUI4 141 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 EI24O14681 340 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 TSPAN8P19075 237 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 ACSBG2Q5FVE4 666 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 KIAA1614Q5VZ46 1190 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 SPATA6LQ8N4H0 392 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 COX18Q8N8Q8 333 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 C10orf82Q8WW14 230 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 RBM18Q96H35 190 aaKnown RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 TOR3AQ9H497 397 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 TAS2R10Q9NYW0 307 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 AURKAO14965 403 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 ZNF267Q14586 743 aaPredicted RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 NKD1Q969G9 470 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 SLC25A51Q9H1U9 297 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 C12orf65Q9H3J6 166 aaKnown RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 NUFIP1Q9UHK0 495 aaKnown RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 PAGE1O75459 146 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 PRPS1L1P21108 318 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 NSG1P42857 185 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 GRIN2DO15399 1336 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 WASHC1A8K0Z3 465 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 WASH3PC4AMC7 463 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 INMTO95050 263 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 ALPPP05187 535 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 PKMP14618 531 aaKnown RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 UBAP2Q5T6F2 1119 aaKnown RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 WASH2PQ6VEQ5 465 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 METTL25Q8N6Q8 603 aa19■□□□□ 0.63
HDAC4-201ENST00000345617 TSNAXQ99598 290 aaKnown RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 VRK1Q99986 396 aaPredicted RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 WDR55Q9H6Y2 383 aaPredicted RBP19■□□□□ 0.63
HDAC4-201ENST00000345617 CPN2P22792 545 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 SEC23BQ15437 767 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 ANKS1BQ7Z6G8 1248 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 FNDC8Q8TC99 324 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 ZSCAN5BA6NJL1 495 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 FBP2O00757 339 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 ZNF81P51508 661 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 S100A10P60903 97 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 CRB2Q5IJ48 1285 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 ELMOD2Q8IZ81 293 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 PRPF38BQ5VTL8 546 aaKnown RBP18.99■□□□□ 0.63
HDAC4-201ENST00000345617 WSCD1Q658N2 575 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 TMEM214Q6NUQ4 689 aaKnown RBP18.99■□□□□ 0.63
HDAC4-201ENST00000345617 ZNF767PQ75MW2 155 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 MCEMP1Q8IX19 187 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 LRRC58Q96CX6 371 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 PADI2Q9Y2J8 665 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 TCAF1Q9Y4C2 921 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 TSTD3H0UI37 97 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 TSPAN33Q86UF1 283 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 CLIP4Q8N3C7 705 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 OSBPL7Q9BZF2 842 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 SYT4Q9H2B2 425 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 TESMINQ9Y4I5 508 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 C3P01024 1663 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 ARFGEF2Q9Y6D5 1785 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 TBL1XO60907 577 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 IFNA4P05014 189 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 CTPS1P17812 591 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 SLC13A2Q13183 592 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 CYP1B1Q16678 543 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 NOP16Q9Y3C1 178 aaKnown RBP18.99■□□□□ 0.63
HDAC4-201ENST00000345617 HSPA12AO43301 675 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 CSN2P05814 226 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 MRPL17Q9NRX2 175 aaKnown RBP18.99■□□□□ 0.63
HDAC4-201ENST00000345617 GRM6O15303 877 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 IL3P08700 152 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 HK1P19367 917 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 FKBP1AP62942 108 aaKnown RBP18.99■□□□□ 0.63
HDAC4-201ENST00000345617 ALG10BQ5I7T1 473 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 PITRM1Q5JRX3 1037 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 OR4C15Q8NGM1 316 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 FCAMRQ8WWV6 532 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 TAPBPLQ9BX59 468 aa18.99■□□□□ 0.63
HDAC4-201ENST00000345617 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.98■□□□□ 0.63
HDAC4-201ENST00000345617 DFNA5O60443 496 aa18.98■□□□□ 0.63
HDAC4-201ENST00000345617 MLLT6P55198 1093 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms