RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 GPSM3Q9Y4H4 160 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 COCHO43405 550 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 PCDH7O60245 1069 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 UGT2B17O75795 530 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 CYP11A1P05108 521 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 PRSS56P0CW18 603 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 CAPN3P20807 821 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 CCND3P30281 292 aaPredicted RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 WASP42768 502 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 KCNAB2Q13303 367 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 PLA2G4EQ3MJ16 856 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 PGM2L1Q6PCE3 622 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 ZNF598Q86UK7 904 aaKnown RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 BEND7Q8N7W2 519 aaPredicted RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 STON2Q8WXE9 905 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 SLC29A1Q99808 456 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 GPATCH1Q9BRR8 931 aaKnown RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 B4GALT6Q9UBX8 382 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 FBXO10Q9UK96 956 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 GABRQQ9UN88 632 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 M0QX08 132 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 NME4O00746 187 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 GJA5P36382 358 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 HTR6P50406 440 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 LAPTM4AQ15012 233 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 OR4D1Q15615 310 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 MEP1AQ16819 746 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 CES5AQ6NT32 575 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 KDELC1Q6UW63 502 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 HACD2Q6Y1H2 254 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 TOR3AQ9H497 397 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 IGFLR1Q9H665 355 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 MYH1P12882 1939 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 TJP1Q07157 1748 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 MYH7P12883 1935 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 LOC110117498-PIK3R3F6TDL0 507 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 NPPAP01160 153 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 EPHX1P07099 455 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 FPR1P21462 350 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 DCST1Q5T197 706 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 LRRC66Q68CR7 880 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 TNFAIP8L2Q6P589 184 aaPredicted RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 ATG14Q6ZNE5 492 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 LRRC70Q7Z2Q7 622 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 TTC9BQ8N6N2 239 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 ZNF366Q8N895 744 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 SLAIN1Q8ND83 568 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 FERD3LQ96RJ6 166 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 PHPT1Q9NRX4 125 aaPredicted RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 SEMA3GQ9NS98 782 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 IGSF5Q9NSI5 407 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 KIAA0100Q14667 2235 aaKnown RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 TNFRSF21O75509 655 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 CCNDBP1O95273 360 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 DGKGP49619 791 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 CAP1Q01518 475 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 NFATC2Q13469 925 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 SPATS1Q496A3 300 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 FAM171BQ6P995 826 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 SLC43A3Q8NBI5 491 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 OR52L1Q8NGH7 329 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 TEX47Q8TBZ9 253 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 ADAMTS15Q8TE58 950 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 HPS1Q92902 700 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 SYNDIG1Q9H7V2 258 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 C3orf14Q9HBI5 128 aa7.02□□□□□ -1.28
VCAN-202ENST00000342785 PRSS51A0A1B0GVH4 220 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 M0QZQ0 153 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 PPP6CO00743 305 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 JUNP05412 331 aaKnown RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 FYNP06241 537 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 RFC2P35250 354 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 PNLIPRP1P54315 467 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 HEPACAMQ14CZ8 416 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 SNAPC1Q16533 368 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 RTP2Q5QGT7 225 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 GPRC6AQ5T6X5 926 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 AGTRAPQ6RW13 159 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 FAR1Q8WVX9 515 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 ING5Q8WYH8 240 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 SCAMP4Q969E2 229 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 HSPBAP1Q96EW2 488 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 CD244Q9BZW8 370 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 ZNF696Q9H7X3 374 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 EQTNQ9NQ60 294 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 SDR39U1Q9NRG7 319 aaPredicted RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 FLRT1Q9NZU1 646 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 TMEM9Q9P0T7 183 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 ZNF282Q9UDV7 671 aaPredicted RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 PGAP2Q9UHJ9 254 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 ANKRD12Q6UB98 2062 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 UBR2Q8IWV8 1755 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 A0A1W2PRB8 838 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 ZNF840PA6NDX5 716 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 AGRPO00253 132 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 TSC22D2O75157 780 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 CCNYL3P0C7X3 344 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 CD36P16671 472 aa7.02□□□□□ -1.29
VCAN-202ENST00000342785 AZGP1P25311 298 aaKnown RBP7.02□□□□□ -1.29
VCAN-202ENST00000342785 DNAJA1P31689 397 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms