RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 THEGLP0DJG4 465 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 SLC6A12P48065 614 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 CSTF1Q05048 431 aaKnown RBP16.86■□□□□ 0.29
CLDN4-201ENST00000340958 PRKG2Q13237 762 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 LSM12Q3MHD2 195 aaKnown RBP16.86■□□□□ 0.29
CLDN4-201ENST00000340958 METTL21CQ5VZV1 264 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 XKR5Q6UX68 686 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 ABI3BPQ7Z7G0 1075 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 THOC6Q86W42 341 aaKnown RBP16.86■□□□□ 0.29
CLDN4-201ENST00000340958 RAB42Q8N4Z0 105 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 CEP70Q8NHQ1 597 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 KLHDC7BQ96G42 594 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 SCARF2Q96GP6 870 aaPredicted RBP16.86■□□□□ 0.29
CLDN4-201ENST00000340958 CCDC28BQ9BUN5 200 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 MIR1-1HGQ9H1L0 117 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 FAM86C1Q9NVL1 165 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 LNPEPQ9UIQ6 1025 aa16.86■□□□□ 0.29
CLDN4-201ENST00000340958 ATXN2Q99700 1313 aaKnown RBP16.85■□□□□ 0.29
CLDN4-201ENST00000340958 ATP6AP2A0A1C7CYW4 349 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 CLGNO14967 610 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 PIP5K1BO14986 540 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 ATP6AP2O75787 350 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 CLDN9O95484 217 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 TNFP01375 233 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 ENO1P06733 434 aaKnown RBP16.85■□□□□ 0.29
CLDN4-201ENST00000340958 LINC00032P0C843 101 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 EBLN1P0CF75 366 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 SP9P0CG40 484 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 IMPA1P29218 277 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 HALP42357 657 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 TUBB3Q13509 450 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 LRP8Q14114 963 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 TPRG1LQ5T0D9 272 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 CAPN13Q6MZZ7 669 aaPredicted RBP16.85■□□□□ 0.29
CLDN4-201ENST00000340958 LETMD1Q6P1Q0 360 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 OR5K2Q8NHB8 316 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 SLC6A18Q96N87 628 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 FBXO4Q9UKT5 387 aa16.85■□□□□ 0.29
CLDN4-201ENST00000340958 METTL12A8MUP2 240 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 SDHDO14521 159 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 TDGF1P13385 188 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 NHLH1Q02575 133 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 UBAP2LQ14157 1087 aaKnown RBP16.84■□□□□ 0.29
CLDN4-201ENST00000340958 UGT3A2Q3SY77 523 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 THEMIS2Q5TEJ8 643 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 FAM219BQ5XKK7 198 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 SLC36A4Q6YBV0 504 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 CADM4Q8NFZ8 388 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 FAM174AQ8TBP5 190 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 ATOH1Q92858 354 aaPredicted RBP16.84■□□□□ 0.29
CLDN4-201ENST00000340958 TUBGCP3Q96CW5 907 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 PRR11Q96HE9 360 aaPredicted RBP16.84■□□□□ 0.29
CLDN4-201ENST00000340958 PRDM8Q9NQV8 689 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 TXLNGQ9NUQ3 528 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 ZNF225Q9UK10 706 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 PLAGL1Q9UM63 463 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 WDR37Q9Y2I8 494 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 K7ESF4 209 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 CD27P26842 260 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 ACTR1BP42025 376 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 PNLIPRP1P54315 467 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 INHBCP55103 352 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 ACTR1AP61163 376 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 CTBSQ01459 385 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 CDC16Q13042 620 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 TRAF3Q13114 568 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 ALG11Q2TAA5 492 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 SLC30A9Q6PML9 568 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 IL27RAQ6UWB1 636 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 TBC1D21Q8IYX1 336 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 ACTRT2Q8TDY3 377 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 ZNF480Q8WV37 535 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 INSM2Q96T92 566 aaPredicted RBP16.84■□□□□ 0.29
CLDN4-201ENST00000340958 TUBB6Q9BUF5 446 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 NTMT1Q9BV86 223 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 PCED1AQ9H1Q7 454 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 SAR1AQ9NR31 198 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 PTGDR2Q9Y5Y4 395 aa16.84■□□□□ 0.29
CLDN4-201ENST00000340958 ZNF839A8K0R7 811 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 ANKRD65E5RJM6 399 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 FFAR3O14843 346 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 GPR42O15529 346 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 VPS4BO75351 444 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 AK4P27144 223 aaPredicted RBP16.83■□□□□ 0.28
CLDN4-201ENST00000340958 ILF3Q12906 894 aaKnown RBP eCLIP16.83■□□□□ 0.28
CLDN4-201ENST00000340958 UAP1L1Q3KQV9 507 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 CAPRIN2Q6IMN6 1127 aaKnown RBP16.83■□□□□ 0.28
CLDN4-201ENST00000340958 DUS1LQ6P1R4 473 aaKnown RBP16.83■□□□□ 0.28
CLDN4-201ENST00000340958 SCIMPQ6UWF3 145 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 HOMEZQ8IX15 550 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 STON2Q8WXE9 905 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 SH3KBP1Q96B97 665 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 MAELQ96JY0 434 aaKnown RBP16.83■□□□□ 0.28
CLDN4-201ENST00000340958 CATSPER2Q96P56 530 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 TMEM168Q9H0V1 697 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 INTS7Q9NVH2 962 aaKnown RBP16.83■□□□□ 0.28
CLDN4-201ENST00000340958 RIC8BQ9NVN3 520 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 TRPS1Q9UHF7 1281 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 RNF11Q9Y3C5 154 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 DYRK1BQ9Y463 629 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms