RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SLC13A5Q86YT5 568 aaPredicted RBP10.56□□□□□ -0.72
ATXN3-201ENST00000340660 FAM184AQ8NB25 1140 aa10.56□□□□□ -0.72
ATXN3-201ENST00000340660 RELL2Q8NC24 303 aaPredicted RBP10.56□□□□□ -0.72
ATXN3-201ENST00000340660 RNASE6Q93091 150 aaKnown RBP10.56□□□□□ -0.72
ATXN3-201ENST00000340660 CARD9Q9H257 536 aa10.56□□□□□ -0.72
ATXN3-201ENST00000340660 FANCLQ9NW38 375 aa10.56□□□□□ -0.72
ATXN3-201ENST00000340660 TMEM160Q9NX00 188 aa10.56□□□□□ -0.72
ATXN3-201ENST00000340660 CTSFQ9UBX1 484 aa10.56□□□□□ -0.72
ATXN3-201ENST00000340660 LPAR3Q9UBY5 353 aa10.56□□□□□ -0.72
ATXN3-201ENST00000340660 POMT2Q9UKY4 750 aa10.56□□□□□ -0.72
ATXN3-201ENST00000340660 FAM215AQ9Y5M1 114 aa10.56□□□□□ -0.72
ATXN3-201ENST00000340660 PYGLP06737 847 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 SRD5A1P18405 259 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 IL4RP24394 825 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 COMPP49747 757 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-201ENST00000340660 MXI1P50539 228 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 NR0B1P51843 470 aaKnown RBP10.55□□□□□ -0.72
ATXN3-201ENST00000340660 PDCLQ13371 301 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 GALNT3Q14435 633 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 DEFB110Q30KQ9 67 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 TDRD12Q587J7 1177 aaKnown RBP10.55□□□□□ -0.72
ATXN3-201ENST00000340660 FKBP15Q5T1M5 1219 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 TXNRD3NBQ6F5E7 133 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 RTL6Q6ICC9 239 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 SPINK14Q6IE38 97 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 CCDC73Q6ZRK6 1079 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 NDUFAF7Q7L592 441 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 ZNF655Q8N720 491 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-201ENST00000340660 LLPHQ9BRT6 129 aaKnown RBP10.55□□□□□ -0.72
ATXN3-201ENST00000340660 SLC26A1Q9H2B4 701 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 TNMDQ9H2S6 317 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 ESRP2Q9H6T0 727 aaKnown RBP10.55□□□□□ -0.72
ATXN3-201ENST00000340660 PDFQ9HBH1 243 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 ARFGAP3Q9NP61 516 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 SSU72Q9NP77 194 aaKnown RBP10.55□□□□□ -0.72
ATXN3-201ENST00000340660 TXLNGQ9NUQ3 528 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 ANKRD10Q9NXR5 420 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 UBA2Q9UBT2 640 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-201ENST00000340660 FRMD4BQ9Y2L6 1034 aa10.55□□□□□ -0.72
ATXN3-201ENST00000340660 GSAPA4D1B5 854 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 FADS2P1A8MWK0 482 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 EIF3CLB5ME19 914 aaKnown RBP10.54□□□□□ -0.72
ATXN3-201ENST00000340660 FAM72CH0Y354 149 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 ZSCAN9O15535 394 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-201ENST00000340660 CDC40O60508 579 aaKnown RBP eCLIP10.54□□□□□ -0.72
ATXN3-201ENST00000340660 FBXO24O75426 580 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 ONECUT2O95948 504 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 CYP2A6P11509 494 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-201ENST00000340660 PAX1P15863 534 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 CREB1P16220 341 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 ZNF7P17097 686 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-201ENST00000340660 POLR2CP19387 275 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-201ENST00000340660 CD96P40200 585 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 SULT1E1P49888 294 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 DEUP1Q05D60 604 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 VEZF1Q14119 521 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 OR1C1Q15619 314 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 ACKR1Q16570 336 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 IFI16Q16666 785 aaKnown RBP10.54□□□□□ -0.72
ATXN3-201ENST00000340660 FAM72AQ5TYM5 149 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 FAM72DQ6L9T8 149 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 ARMC6Q6NXE6 501 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 SHC4Q6S5L8 630 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 OLFML1Q6UWY5 402 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 FAM183BPQ6ZVS7 135 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 INTS8Q75QN2 995 aaKnown RBP10.54□□□□□ -0.72
ATXN3-201ENST00000340660 FAM72BQ86X60 149 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 BEST3Q8N1M1 668 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 ARIH2OSQ8N7S6 290 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 TMEM178AQ8NBL3 297 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 SLC22A8Q8TCC7 542 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-201ENST00000340660 SMPDL3BQ92485 455 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 NT5C3BQ969T7 300 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 TBCBQ99426 244 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 EIF3CQ99613 913 aaKnown RBP10.54□□□□□ -0.72
ATXN3-201ENST00000340660 SHARPINQ9H0F6 387 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 KCTD10Q9H3F6 313 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 FAM207AQ9NSI2 230 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-201ENST00000340660 PCDHB4Q9Y5E5 795 aa10.54□□□□□ -0.72
ATXN3-201ENST00000340660 EPB41L2O43491 1005 aaKnown RBP10.53□□□□□ -0.72
ATXN3-201ENST00000340660 TFEBP19484 476 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 FPR1P21462 350 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 FUT4P22083 530 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 ACVR2AP27037 513 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 GABRA4P48169 554 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 ASCL1P50553 236 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 HMGN5P82970 282 aaKnown RBP10.53□□□□□ -0.72
ATXN3-201ENST00000340660 FBXL19-AS1Q494R0 122 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 CNSTQ6PJW8 725 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 FAM214BQ7L5A3 538 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 STRADAQ7RTN6 431 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 UBE3DQ7Z6J8 389 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 ARHGAP12Q8IWW6 846 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 FAM98AQ8NCA5 519 aaKnown RBP10.53□□□□□ -0.72
ATXN3-201ENST00000340660 CLIC6Q96NY7 704 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 SMIM14Q96QK8 99 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 WDR24Q96S15 920 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 CPXM1Q96SM3 734 aa10.53□□□□□ -0.72
ATXN3-201ENST00000340660 CRB3Q9BUF7 120 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms