RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 MED16Q9Y2X0 877 aa18.37■□□□□ 0.53
PSPC1-201ENST00000338910 HIDE1A8MVS5 230 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 SMAD6O43541 496 aaKnown RBP18.36■□□□□ 0.53
PSPC1-201ENST00000338910 NOBOXO60393 691 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 LATS1O95835 1130 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 BMP1P13497 986 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 CTPS1P17812 591 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 IL12AP29459 219 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 LCP2Q13094 533 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 MAPK11Q15759 364 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 PTPRNQ16849 979 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 ZRANB3Q5FWF4 1079 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 TMC8Q8IU68 726 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 ARMC8Q8IUR7 673 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 TXNDC15Q96J42 360 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 SMG9Q9H0W8 520 aaKnown RBP18.36■□□□□ 0.53
PSPC1-201ENST00000338910 CPNE5Q9HCH3 593 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 GALPQ9UBC7 116 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 PRKAG2Q9UGJ0 569 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 CHD9Q3L8U1 2897 aa18.36■□□□□ 0.53
PSPC1-201ENST00000338910 A0A1W2PRU2 124 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 TTC34A8MYJ7 566 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 GPR39O43194 453 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 ADH1AP07327 375 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 ANXA6P08133 673 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 HOXB8P17481 243 aaPredicted RBP18.35■□□□□ 0.53
PSPC1-201ENST00000338910 SUOXP51687 545 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 IFITM2Q01629 132 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 FPGSQ05932 587 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 PPIGQ13427 754 aaKnown RBP eCLIP18.35■□□□□ 0.531e-9■■□□□ 14.1
PSPC1-201ENST00000338910 ACOX1Q15067 660 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 SETMARQ53H47 684 aaPredicted RBP18.35■□□□□ 0.53
PSPC1-201ENST00000338910 ATAD3BQ5T9A4 648 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 HS3ST5Q8IZT8 346 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 KREMEN2Q8NCW0 462 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 ATOH8Q96SQ7 321 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 CCDC90BQ9GZT6 254 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 CARS2Q9HA77 564 aaKnown RBP18.35■□□□□ 0.53
PSPC1-201ENST00000338910 TAS2R13Q9NYV9 303 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 GFRA2O00451 464 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 MAN1A2O60476 641 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 ALPIP09923 528 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 CCDC159P0C7I6 412 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 EN2P19622 333 aaPredicted RBP18.35■□□□□ 0.53
PSPC1-201ENST00000338910 ALDH4A1P30038 563 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 SERPINB1P30740 379 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 SELPLGQ14242 412 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 TMEM236Q5W0B7 351 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 ANKRD34AQ69YU3 496 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 ADCK1Q86TW2 530 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 DPP10Q8N608 796 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 FAM86B1Q8N7N1 296 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 GLMNQ92990 594 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 SP140LQ9H930 580 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 SUN2Q9UH99 717 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 ZNF229Q9UJW7 825 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 LSM7Q9UK45 103 aaKnown RBP18.35■□□□□ 0.53
PSPC1-201ENST00000338910 TIMM22Q9Y584 194 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 ANKRD36A6QL64 1941 aa18.35■□□□□ 0.53
PSPC1-201ENST00000338910 GGT1P19440 569 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 CD40LGP29965 261 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 GKP32189 559 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 XKR7Q5GH72 579 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 TMEM240Q5SV17 173 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 ZNF691Q5VV52 312 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 DLEU7Q6UYE1 221 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 LACC1Q8IV20 430 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 RHEBL1Q8TAI7 183 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 YIPF6Q96EC8 236 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 ZNF300Q96RE9 604 aaPredicted RBP18.34■□□□□ 0.53
PSPC1-201ENST00000338910 GPR21Q99679 349 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 HOXD1Q9GZZ0 328 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 DNAJB9Q9UBS3 223 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 FAM234BA2RU67 622 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 NUAK1O60285 661 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 VBP1P61758 197 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 LSM3P62310 102 aaKnown RBP18.34■□□□□ 0.53
PSPC1-201ENST00000338910 CATSPEREQ5SY80 951 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 PLPP4Q5VZY2 271 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 TAS2R42Q7RTR8 314 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 PAF1Q8N7H5 531 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 ZNF566Q969W8 418 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 EID2BQ96D98 161 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 RBM4BQ9BQ04 359 aaKnown RBP18.34■□□□□ 0.53
PSPC1-201ENST00000338910 RBM4Q9BWF3 364 aaKnown RBP18.34■□□□□ 0.53
PSPC1-201ENST00000338910 POPDC3Q9HBV1 291 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 ZIM2Q9NZV7 527 aa18.34■□□□□ 0.53
PSPC1-201ENST00000338910 EVLQ9UI08 416 aaPredicted RBP18.34■□□□□ 0.53
PSPC1-201ENST00000338910 INTS6Q9UL03 887 aaKnown RBP18.34■□□□□ 0.53
PSPC1-201ENST00000338910 LOC100130705A0A1B0GUX0 176 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 CCL16O15467 120 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 FSHRP23945 695 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 GRK3P35626 688 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 EIF2DP41214 584 aaKnown RBP18.33■□□□□ 0.53
PSPC1-201ENST00000338910 PPP5CP53041 499 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 MTPNP58546 118 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 NKG7Q16617 165 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 FBXO48Q5FWF7 155 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 CCDC149Q6ZUS6 474 aa18.33■□□□□ 0.53
PSPC1-201ENST00000338910 AKAP14Q86UN6 197 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms