RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 CMIPQ8IY22 773 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 NDUFAF2Q8N183 169 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 PPM1KQ8N3J5 372 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF441Q8N8Z8 693 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 OR6S1Q8NH40 331 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SLC35F5Q8WV83 523 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 C10orf82Q8WW14 230 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 KIAA1191Q96A73 305 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 PCED1BQ96HM7 432 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 NEUROD6Q96NK8 337 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 FCRL5Q96RD9 977 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 KCTD15Q96SI1 283 aaPredicted RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 OMDQ99983 421 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 RHOXF2Q9BQY4 288 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 DESI2Q9BSY9 194 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ZSCAN5AQ9BUG6 496 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SDCBP2Q9H190 292 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 BRMS1Q9HCU9 246 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 CASS4Q9NQ75 786 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ASF1BQ9NVP2 202 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 GPATCH2LQ9NWQ4 482 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 OR6C2Q9NZP2 312 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 TAAR2Q9P1P5 351 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ZFATQ9P243 1243 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 TEKT2Q9UIF3 430 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 FKBPLQ9UIM3 349 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 CRLS1Q9UJA2 301 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 AGO2Q9UKV8 859 aaKnown RBP1.46□□□□□ -2.18
LINC00643-201ENST00000334389 MYO6Q9UM54 1294 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 ABCG2Q9UNQ0 655 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 AP4E1Q9UPM8 1137 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 SLC22A7Q9Y694 548 aa1.46□□□□□ -2.18
LINC00643-201ENST00000334389 A0A1B0GX78 115 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 A0A1W2PQU0 124 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 CDC14CA4D256 554 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 LRRC10BA6NIK2 292 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 EML1O00423 815 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 ZBTB39O15060 712 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 MID1O15344 667 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 NUAK1O60285 661 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 TNNC2P02585 160 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 HPDP32754 393 aaPredicted RBP1.45□□□□□ -2.18
LINC00643-201ENST00000334389 PTDSS1P48651 473 aaKnown RBP1.45□□□□□ -2.18
LINC00643-201ENST00000334389 LIM2P55344 173 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 IL10RBQ08334 325 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 TAF10Q12962 218 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 TUBA3CQ13748 450 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 PRKD1Q15139 912 aaPredicted RBP1.45□□□□□ -2.18
LINC00643-201ENST00000334389 FAM26FQ5R3K3 315 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 EXOSC6Q5RKV6 272 aaKnown RBP1.45□□□□□ -2.18
LINC00643-201ENST00000334389 CEP85LQ5SZL2 805 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 NEPROQ6NW34 567 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 TUBA3EQ6PEY2 450 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 PAQR3Q6TCH7 311 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 CCBE1Q6UXH8 406 aaPredicted RBP1.45□□□□□ -2.18
LINC00643-201ENST00000334389 GDPGP1Q6ZNW5 385 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 C1orf122Q6ZSJ8 110 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF720Q7Z2F6 126 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 TMTC1Q8IUR5 882 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 PPM1NQ8N819 430 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 NFAM1Q8NET5 270 aaPredicted RBP1.45□□□□□ -2.18
LINC00643-201ENST00000334389 FDCSPQ8NFU4 85 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 SUN3Q8TAQ9 357 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 HSD17B8Q92506 261 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 TSR2Q969E8 191 aaKnown RBP1.45□□□□□ -2.18
LINC00643-201ENST00000334389 RNF34Q969K3 372 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 SLC35B4Q969S0 331 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 FAM210BQ96KR6 192 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 C7orf25Q9BPX7 421 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 TTYH2Q9BSA4 534 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 AARSD1Q9BTE6 412 aaKnown RBP1.45□□□□□ -2.18
LINC00643-201ENST00000334389 FICDQ9BVA6 458 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 SLC39A8Q9C0K1 460 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 FAM83DQ9H4H8 585 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 C12orf49Q9H741 205 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 PPP1R3EQ9H7J1 279 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 EPB41L5Q9HCM4 733 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 TMEM8AQ9HCN3 771 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 SLC40A1Q9NP59 571 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 SLC6A20Q9NP91 592 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.45□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF226Q9NYT6 803 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 HACD3Q9P035 362 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 MAP10Q9P2G4 905 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 TUBGCP4Q9UGJ1 667 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 NDOR1Q9UHB4 597 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 CDH22Q9UJ99 828 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 KCNS2Q9ULS6 477 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 SOX13Q9UN79 622 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 RNF6Q9Y252 685 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 ATP8A1Q9Y2Q0 1164 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 PCDHB14Q9Y5E9 798 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 ACTL7BQ9Y614 415 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 ZFHX4Q86UP3 3567 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.45□□□□□ -2.18
LINC00643-201ENST00000334389 LOC390937A0A1W2PQ73 354 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 VGLL3A8MV65 326 aa1.45□□□□□ -2.18
LINC00643-201ENST00000334389 KIF2AO00139 706 aaPredicted RBP1.45□□□□□ -2.18
LINC00643-201ENST00000334389 IFIT3O14879 490 aaKnown RBP1.45□□□□□ -2.18
LINC00643-201ENST00000334389 POLR1CO15160 346 aaPredicted RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms