RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ZNF566Q969W8 418 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 PYURFQ96I23 114 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 ZNF382Q96SR6 550 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 C2orf49Q9BVC5 232 aaPredicted RBP13.43□□□□□ -0.26
SYNE3-201ENST00000334258 BTBD2Q9BX70 525 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 ITPAQ9BY32 194 aa13.43□□□□□ -0.26
SYNE3-201ENST00000334258 LINC00854A0A1B0GVQ3 168 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 GRXCR2A6NFK2 248 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 A8MV72 311 aaPredicted RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 F8W810 466 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 IFRD1O00458 451 aaPredicted RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 SEC22BO75396 215 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 PTTG1O95997 202 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 PGRP06401 933 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 HSMCR30P0CW71 290 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 GADD45AP24522 165 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 THPOP40225 353 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 SCNN1GP51170 649 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 MVKQ03426 396 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 MSANTD2Q6P1R3 559 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 CEP68Q76N32 757 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 PARP16Q8N5Y8 322 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 ARRDC2Q8TBH0 407 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 SLC38A4Q969I6 547 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 CEP19Q96LK0 163 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 DMRTB1Q96MA1 342 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 EMILIN2Q9BXX0 1053 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 KIAA0100Q14667 2235 aaKnown RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 SZT2Q5T011 3432 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 PER2O15055 1255 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 OR1I1O60431 355 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 B3GAT3O94766 335 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 DNTTP04053 509 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 FGF1P05230 155 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 THP07101 528 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 GLULP15104 373 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 HOXC13P31276 330 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 LIPAP38571 399 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 MRPL19P49406 292 aaKnown RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 PURAQ00577 322 aaKnown RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 SPANXN2Q5MJ10 180 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 CPZQ66K79 652 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 CIR1Q86X95 450 aaPredicted RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 DEPDC4Q8N2C3 294 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 PGBD5Q8N414 524 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 C3orf58Q8NDZ4 430 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 DEPDC7Q96QD5 511 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 CDK5RAP1Q96SZ6 601 aaKnown RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 POLR1EQ9GZS1 481 aaKnown RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 KRT84Q9NSB2 600 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 SLC25A37Q9NYZ2 338 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 RNF6Q9Y252 685 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 SLC45A1Q9Y2W3 748 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 ZSWIM8A7E2V4 1837 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 POMCP01189 267 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 HMBSP08397 361 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 ITGAMP11215 1152 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 HOXD8P13378 290 aaPredicted RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 HLA-DPA1P20036 260 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 HTR7P34969 479 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 KRT20P35900 424 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 DAPP51397 102 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 OR2B6P58173 313 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 KRR1Q13601 381 aaKnown RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 DDR2Q16832 855 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 CARD16Q5EG05 197 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 XKR4Q5GH76 650 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 ZC3H12BQ5HYM0 836 aaKnown RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 PIK3R6Q5UE93 754 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 CACHD1Q5VU97 1274 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 GDPD3Q7L5L3 318 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 PRSS48Q7RTY5 328 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 ZNF467Q7Z7K2 595 aaPredicted RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 METTL23Q86XA0 190 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 OR8H2Q8N162 312 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 LIX1Q8N485 282 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 NATD1Q8N6N6 113 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 GPR150Q8NGU9 434 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 ZFYVE19Q96K21 471 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 PPP3R2Q96LZ3 170 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 COPS4Q9BT78 406 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 ZYG11BQ9C0D3 744 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 IPPKQ9H8X2 491 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 TMLHEQ9NVH6 421 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 C1orf109Q9NX04 203 aa13.42□□□□□ -0.26
SYNE3-201ENST00000334258 SAMHD1Q9Y3Z3 626 aaKnown RBP13.42□□□□□ -0.26
SYNE3-201ENST00000334258 A0A096LPI6 279 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 LOC285095A0A1B0GVY8 99 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 GPR182O15218 404 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 ZW10O43264 779 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 PRKAR2AP13861 404 aaKnown RBP13.41□□□□□ -0.26
SYNE3-201ENST00000334258 JUNDP17535 347 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 C21orf33P30042 268 aaPredicted RBP13.41□□□□□ -0.26
SYNE3-201ENST00000334258 CTSKP43235 329 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 CPT1AP50416 773 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 CYP4F2P78329 520 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 GBX1Q14549 363 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 TIGD6Q17RP2 521 aa13.41□□□□□ -0.26
SYNE3-201ENST00000334258 TIGD5Q53EQ6 642 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms