RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 SFRP1Q8N474 314 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 NPAS2Q99743 824 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 OSBPL6Q9BZF3 934 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 RIC8BQ9NVN3 520 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 CIDEBQ9UHD4 219 aa19.74■□□□□ 0.75
RIPPLY3-201ENST00000329553 DENRO43583 198 aaKnown RBP19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 PLRG1O43660 514 aaKnown RBP19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 CATP04040 527 aaKnown RBP19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 ME2P23368 584 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 ITPKAP23677 461 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 ACADVLP49748 655 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 ART3Q13508 389 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 NFE2L1Q14494 772 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 CCDC85BQ15834 202 aaPredicted RBP19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 SPATA19Q7Z5L4 167 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 OR2L2Q8NH16 312 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 DNASE1L2Q92874 299 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 FOPNLQ96NB1 174 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 CENPKQ9BS16 269 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 FBRSQ9HAH7 460 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 TRPS1Q9UHF7 1281 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 RIMS3Q9UJD0 308 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 TRIOBPQ9H2D6 2365 aa19.73■□□□□ 0.75
RIPPLY3-201ENST00000329553 NARSO43776 548 aaKnown RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 BCAS2O75934 225 aaPredicted RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 SNRPB2P08579 225 aaKnown RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 PFN3P60673 137 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 RPS21P63220 83 aaKnown RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 MRPS22P82650 360 aaKnown RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 MRPS21P82921 87 aaKnown RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 SMAD4Q13485 552 aaKnown RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 IRF4Q15306 451 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 C6orf136Q5SQH8 315 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 CHCHD4Q8N4Q1 142 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 TP53I13Q8NBR0 393 aaPredicted RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 C1QTNF2Q9BXJ5 285 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 TEX101Q9BY14 249 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 SDR39U1Q9NRG7 319 aaPredicted RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 FARSBQ9NSD9 589 aaKnown RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 ZNHIT2Q9UHR6 403 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 OR1A2Q9Y585 309 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 GPR45Q9Y5Y3 372 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 A0A1W2PQU0 124 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 MGAT4DA6NG13 374 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 SHISA7A6NL88 538 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 FBP2O00757 339 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 CFLARO15519 480 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 CLDN9O95484 217 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 CAPNS1P04632 268 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 CHN2P52757 468 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 MAPRE2Q15555 327 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 FAM83HQ6ZRV2 1179 aaPredicted RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 TRMT11Q7Z4G4 463 aaKnown RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 TICAM1Q8IUC6 712 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 MIER2Q8N344 545 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 MARVELD2Q8N4S9 558 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 CCDC138Q96M89 665 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 GAS2L1Q99501 681 aaPredicted RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 PKP4Q99569 1192 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 UBE2ZQ9H832 354 aaPredicted RBP19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 ACTR8Q9H981 624 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 KLQ9UEF7 1012 aa19.72■□□□□ 0.75
RIPPLY3-201ENST00000329553 ACOT8O14734 319 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 C1orf105O95561 183 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 IDO1P14902 403 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 TRIM23P36406 574 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 ADPRHP54922 357 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 POLE2P56282 527 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 STX5Q13190 355 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 SGCGQ13326 291 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 BHLHE22Q8NFJ8 381 aaPredicted RBP19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 HM13Q8TCT9 377 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 NCSTNQ92542 709 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 SIPA1Q96FS4 1042 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 SH3GL3Q99963 347 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 DNAJC11Q9NVH1 559 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 INTS7Q9NVH2 962 aaKnown RBP19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 STOX2Q9P2F5 926 aaPredicted RBP19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 SLC23A2Q9UGH3 650 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 CCL27Q9Y4X3 112 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 PRAMEF4O60810 478 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 RNGTTO60942 597 aaKnown RBP19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 MSX2P35548 267 aaPredicted RBP19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 ERVK-8P63133 956 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 RPS6KA2Q15349 733 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 TLR1Q15399 786 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 CNPY1Q3B7I2 92 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 TMEM259Q4ZIN3 620 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 ATP6AP1LQ52LC2 224 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 SLC44A4Q53GD3 710 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 PRAMEF9Q5VWM5 478 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 AGTRAPQ6RW13 159 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 RPLP0P6Q8NHW5 317 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 C1orf50Q9BV19 199 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 MRPL1Q9BYD6 325 aaKnown RBP19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 SLC17A9Q9BYT1 436 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 AIG1Q9NVV5 245 aa19.71■□□□□ 0.75
RIPPLY3-201ENST00000329553 PRSS51A0A1B0GVH4 220 aa19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 LSM1O15116 133 aaKnown RBP19.7■□□□□ 0.74
RIPPLY3-201ENST00000329553 ULK1O75385 1050 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms