RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SNAP47Q5SQN1 464 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.64■□□□□ 0.09
SYNM-201ENST00000328642 TIFAQ96CG3 184 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 CD244Q9BZW8 370 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 LIN28AQ9H9Z2 209 aaKnown RBP15.64■□□□□ 0.09
SYNM-201ENST00000328642 CCDC177Q9NQR7 707 aaPredicted RBP15.64■□□□□ 0.09
SYNM-201ENST00000328642 FER1L6Q2WGJ9 1857 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 A0A1W2PP18 115 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 BBIP1A8MTZ0 92 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 KLK1P06870 262 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 CHRM5P08912 532 aaPredicted RBP15.64■□□□□ 0.09
SYNM-201ENST00000328642 FUT4P22083 530 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 VIPR1P32241 457 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 PTGER1P34995 402 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 SOX9P48436 509 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 MANEALQ5VSG8 457 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 THOC6Q86W42 341 aaKnown RBP15.64■□□□□ 0.09
SYNM-201ENST00000328642 FAM20CQ8IXL6 584 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 KRT78Q8N1N4 520 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 ASB9Q96DX5 294 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 PLEKHA8Q96JA3 519 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 EGLN2Q96KS0 407 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 NLNQ9BYT8 704 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 ARNT2Q9HBZ2 717 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 OR1A2Q9Y585 309 aa15.64■□□□□ 0.09
SYNM-201ENST00000328642 MANBAO00462 879 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 OR6B1O95007 311 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 ZNF140P52738 457 aaPredicted RBP15.63■□□□□ 0.09
SYNM-201ENST00000328642 ERVK-21P61565 698 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 ELP6Q0PNE2 266 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 ZNF542PQ5EBM4 170 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 BRAT1Q6PJG6 821 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 DEF8Q6ZN54 512 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 SH2D5Q6ZV89 423 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 CELF5Q8N6W0 485 aaKnown RBP15.63■□□□□ 0.09
SYNM-201ENST00000328642 ARMC5Q96C12 935 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 NSMCE3Q96MG7 304 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 GORASP1Q9BQQ3 440 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 PAIP1Q9H074 479 aaKnown RBP15.63■□□□□ 0.09
SYNM-201ENST00000328642 CHCHD3Q9NX63 227 aaKnown RBP15.63■□□□□ 0.09
SYNM-201ENST00000328642 FBXL12Q9NXK8 326 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 RGS5O15539 181 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 CD72P21854 359 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 C16orf72Q14CZ0 275 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 PDGFRLQ15198 375 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 MED27Q6P2C8 311 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 HSD11B1LQ7Z5J1 315 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 TMEM145Q8NBT3 493 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 FIBINQ8TAL6 211 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 HMGB4Q8WW32 186 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 TFGQ92734 400 aaPredicted RBP15.63■□□□□ 0.09
SYNM-201ENST00000328642 TRAPPC9Q96Q05 1148 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 C1orf21Q9H246 121 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 PCTPQ9UKL6 214 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 LOC100506127A0A0U1RQW1 187 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 FAM234BA2RU67 622 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 CXCR6O00574 342 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 PDYNP01213 254 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 IGLV3-25P01717 112 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 NR2F1P10589 423 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 RANBP1P43487 201 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 OR4D2P58180 307 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 RPS13P62277 151 aaKnown RBP15.63■□□□□ 0.09
SYNM-201ENST00000328642 MAPK11Q15759 364 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 CCSAPQ6IQ19 270 aaPredicted RBP15.63■□□□□ 0.09
SYNM-201ENST00000328642 KBTBD2Q8IY47 623 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 CMTR2Q8IYT2 770 aaKnown RBP15.63■□□□□ 0.09
SYNM-201ENST00000328642 SMYD1Q8NB12 490 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 SCRN2Q96FV2 425 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 DPEP2Q9H4A9 486 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 DNMT3BQ9UBC3 853 aaKnown RBP15.63■□□□□ 0.09
SYNM-201ENST00000328642 VPS29Q9UBQ0 182 aa15.63■□□□□ 0.09
SYNM-201ENST00000328642 WASH4PA8MWX3 477 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 F11P03951 625 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 SPINT3P49223 89 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 LDLRAP1Q5SW96 308 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 C8orf59Q8N0T1 100 aaPredicted RBP15.62■□□□□ 0.09
SYNM-201ENST00000328642 OR7A2PQ8NGA2 310 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 FBXL20Q96IG2 436 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 ANKRD27Q96NW4 1050 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 REXO4Q9GZR2 422 aaKnown RBP15.62■□□□□ 0.09
SYNM-201ENST00000328642 PHPT1Q9NRX4 125 aaPredicted RBP15.62■□□□□ 0.09
SYNM-201ENST00000328642 LHX3Q9UBR4 397 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 SGTAO43765 313 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 ALDOCP09972 364 aaKnown RBP15.62■□□□□ 0.09
SYNM-201ENST00000328642 SLC6A2P23975 617 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 ALDH4A1P30038 563 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 SFRP1Q8N474 314 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 KCT2Q8NC54 265 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 OVCA2Q8WZ82 227 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 RANBP9Q96S59 729 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 TRMT61BQ9BVS5 477 aaKnown RBP15.62■□□□□ 0.09
SYNM-201ENST00000328642 C1QTNF1Q9BXJ1 281 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 CARS2Q9HA77 564 aaKnown RBP15.62■□□□□ 0.09
SYNM-201ENST00000328642 SMURF2Q9HAU4 748 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 DUSP12Q9UNI6 340 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 GMPPBQ9Y5P6 360 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 A0A1B0GTL3 188 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 H7BY64 318 aa15.62■□□□□ 0.09
SYNM-201ENST00000328642 CTSCP53634 463 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms