RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 PIH1D2Q8WWB5 315 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 MUL1Q969V5 352 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 SDCCAG3Q96C92 435 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 C2orf49Q9BVC5 232 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 TOR3AQ9H497 397 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 IPPKQ9H8X2 491 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 POPDC3Q9HBV1 291 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 CCDC154A6NI56 674 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 CCL16O15467 120 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 NADKO95544 446 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 CCL5P13501 91 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 PTPN2P17706 415 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 HMGCLP35914 325 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 CACNG1Q06432 222 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 ARHGEF7Q14155 803 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 RETSATQ6NUM9 610 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 RBM23Q86U06 439 aaKnown RBP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 STK32CQ86UX6 486 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 CHDHQ8NE62 594 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 OR4F6Q8NGB9 312 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 MRPS31Q92665 395 aaKnown RBP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 KCNJ9Q92806 393 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 VMP1Q96GC9 406 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 KCTD14Q9BQ13 255 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 ZDHHC6Q9H6R6 413 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 EYSQ5T1H1 3165 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 ALPLP05186 524 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 FCGR1AP12314 374 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 ITGB8P26012 769 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 TGFBR1P36897 503 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 VBP1P61758 197 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 PPP1R8Q12972 351 aaKnown RBP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 ATP6AP1LQ52LC2 224 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 C6orf141Q5SZD1 244 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 SLC39A5Q6ZMH5 540 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 TMBIM1Q969X1 311 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 SDR39U1Q9NRG7 319 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 ZNF229Q9UJW7 825 aa15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 POLR3HQ9Y535 204 aaPredicted RBP15.2■□□□□ 0.02
SHROOM1-201ENST00000319854 NPIPB15A6NHN6 443 aaPredicted RBP15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 FFAR2O15552 330 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 SLC22A3O75751 556 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 ESR1P03372 595 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 S100BP04271 92 aaPredicted RBP15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 G6PDP11413 515 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 BPIP17213 487 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 PCMT1P22061 227 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 IL12AP29459 219 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 MTPNP58546 118 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 ABRAXAS2Q15018 415 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 LRIT3Q3SXY7 679 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 C6orf136Q5SQH8 315 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 USP43Q70EL4 1123 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 GOLGA7Q7Z5G4 137 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 SLC39A11Q8N1S5 342 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 ASB2Q96Q27 587 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 BTBD2Q9BX70 525 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 WWOXQ9NZC7 414 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 LSM7Q9UK45 103 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 VPS9D1Q9Y2B5 631 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 GPR45Q9Y5Y3 372 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 BBIP1A8MTZ0 92 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 TGM5O43548 720 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 NOBOXO60393 691 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 UROSP10746 265 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 THRBP10828 461 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 SLC2A4P14672 509 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 ZNF7P17097 686 aaPredicted RBP15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 MAGP20916 626 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 ATP4BP51164 291 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 OR4D2P58180 307 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 HSPA14Q0VDF9 509 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 NFATC2Q13469 925 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 PTGR1Q14914 329 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 CYP2U1Q7Z449 544 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 KIAA2013Q8IYS2 634 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 CLEC4FQ8N1N0 589 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 GOLM1Q8NBJ4 401 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 AMBRA1Q9C0C7 1298 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 MIR1-1HGQ9H1L0 117 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 RMND5AQ9H871 391 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 IL21Q9HBE4 155 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 SPG21Q9NZD8 308 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 INTS6Q9UL03 887 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 TMA7Q9Y2S6 64 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 OR51B4Q9Y5P0 310 aa15.19■□□□□ 0.02
SHROOM1-201ENST00000319854 GUCY1B2O75343 617 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 MLYCDO95822 493 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 GTF2H2Q13888 395 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 TPGS2Q68CL5 300 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 GTF2H2CQ6P1K8 395 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 BLOC1S3Q6QNY0 202 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 Q6ZSR9 355 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 MMAAQ8IVH4 418 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 ZNF366Q8N895 744 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 MINDY2Q8NBR6 621 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 BPIFB1Q8TDL5 484 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 SORCS1Q8WY21 1168 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 PYCR2Q96C36 320 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms