RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 RAB42Q8N4Z0 105 aa13.69□□□□□ -0.22
MSRA-201ENST00000317173 SPDYE1Q8NFV5 336 aaPredicted RBP13.69□□□□□ -0.22
MSRA-201ENST00000317173 ZNF473Q8WTR7 871 aaKnown RBP13.69□□□□□ -0.22
MSRA-201ENST00000317173 C12orf66Q96MD2 445 aa13.69□□□□□ -0.22
MSRA-201ENST00000317173 TMEM79Q9BSE2 394 aa13.69□□□□□ -0.22
MSRA-201ENST00000317173 FAM107BQ9H098 131 aa13.69□□□□□ -0.22
MSRA-201ENST00000317173 SLC32A1Q9H598 525 aa13.69□□□□□ -0.22
MSRA-201ENST00000317173 ERVMER34-1Q9H9K5 563 aa13.69□□□□□ -0.22
MSRA-201ENST00000317173 SPATA7Q9P0W8 599 aa13.69□□□□□ -0.22
MSRA-201ENST00000317173 STOX2Q9P2F5 926 aaPredicted RBP13.69□□□□□ -0.22
MSRA-201ENST00000317173 KLHL14Q9P2G3 628 aa13.69□□□□□ -0.22
MSRA-201ENST00000317173 OPTCQ9UBM4 332 aa13.69□□□□□ -0.22
MSRA-201ENST00000317173 APOBEC3BQ9UH17 382 aaKnown RBP13.69□□□□□ -0.22
MSRA-201ENST00000317173 PSMD13Q9UNM6 376 aa13.69□□□□□ -0.22
MSRA-201ENST00000317173 WDR37Q9Y2I8 494 aa13.69□□□□□ -0.22
MSRA-201ENST00000317173 PLEKHM1Q9Y4G2 1056 aa13.69□□□□□ -0.22
MSRA-201ENST00000317173 OR5K4A6NMS3 321 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 GIPC1O14908 333 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 SNX3O60493 162 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 KATNA1O75449 491 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 LYPLA1O75608 230 aaPredicted RBP13.68□□□□□ -0.22
MSRA-201ENST00000317173 CHRNGP07510 517 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 MTHFD1P11586 935 aaKnown RBP13.68□□□□□ -0.22
MSRA-201ENST00000317173 F3P13726 295 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 JUNDP17535 347 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 RPL10P27635 214 aaKnown RBP13.68□□□□□ -0.22
MSRA-201ENST00000317173 HSPA7P48741 367 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 AGTR2P50052 363 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 PKNOX1P55347 436 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 C21orf59P57076 290 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 SPATA21Q7Z572 469 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 SPATS2Q86XZ4 545 aaKnown RBP13.68□□□□□ -0.22
MSRA-201ENST00000317173 FAR2Q96K12 515 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 INSM2Q96T92 566 aaPredicted RBP13.68□□□□□ -0.22
MSRA-201ENST00000317173 PKP4Q99569 1192 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 GTPBP2Q9BX10 602 aaKnown RBP13.68□□□□□ -0.22
MSRA-201ENST00000317173 RAB11FIP5Q9BXF6 653 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 ZNF395Q9H8N7 513 aaPredicted RBP13.68□□□□□ -0.22
MSRA-201ENST00000317173 DNAJC28Q9NX36 388 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 TBC1D29Q9UFV1 150 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 ST14Q9Y5Y6 855 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 COLEC10Q9Y6Z7 277 aa13.68□□□□□ -0.22
MSRA-201ENST00000317173 TDRD6O60522 2096 aaKnown RBP13.68□□□□□ -0.22
MSRA-201ENST00000317173 ARHGEF17Q96PE2 2063 aaPredicted RBP13.67□□□□□ -0.22
MSRA-201ENST00000317173 A6NCN8 305 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 SLC16A8O95907 504 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 FGF4P08620 206 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 ERGP11308 486 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 EPB42P16452 691 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 CCND1P24385 295 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 AK4P27144 223 aaPredicted RBP13.67□□□□□ -0.22
MSRA-201ENST00000317173 IMPA1P29218 277 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 RPL14P50914 215 aaKnown RBP13.67□□□□□ -0.22
MSRA-201ENST00000317173 HNRNPKP61978 463 aaKnown RBP eCLIP13.67□□□□□ -0.22
MSRA-201ENST00000317173 GTF2H2Q13888 395 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 CLCA4Q14CN2 919 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 ELOCQ15369 112 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 RPE65Q16518 533 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 CGB2Q6NT52 195 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 GTF2H2CQ6P1K8 395 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 AGTRAPQ6RW13 159 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 IL27RAQ6UWB1 636 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 MBOAT1Q6ZNC8 495 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 CUZD1Q86UP6 607 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 NRROSQ86YC3 692 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 ZNF781Q8N8C0 355 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 OR5AR1Q8NGP9 310 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 OR56A3Q8NH54 315 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 ZFPM2Q8WW38 1151 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 ZNF382Q96SR6 550 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 ELAC2Q9BQ52 826 aaKnown RBP13.67□□□□□ -0.22
MSRA-201ENST00000317173 HGH1Q9BTY7 390 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 STN1Q9H668 368 aaKnown RBP13.67□□□□□ -0.22
MSRA-201ENST00000317173 PRDM8Q9NQV8 689 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 IMP3Q9NV31 184 aaKnown RBP13.67□□□□□ -0.22
MSRA-201ENST00000317173 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.67□□□□□ -0.22
MSRA-201ENST00000317173 SPASTQ9UBP0 616 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 VTI1BQ9UEU0 232 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 KLF15Q9UIH9 416 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 LNPEPQ9UIQ6 1025 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 ANGPTL3Q9Y5C1 460 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 PCDH15Q96QU1 1955 aa13.67□□□□□ -0.22
MSRA-201ENST00000317173 CACNA1EQ15878 2313 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 LRRC14BA6NHZ5 514 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 CCNT2O60583 730 aaKnown RBP13.66□□□□□ -0.22
MSRA-201ENST00000317173 OTCP00480 354 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 ALOX15P16050 662 aaPredicted RBP13.66□□□□□ -0.22
MSRA-201ENST00000317173 CDH13P55290 713 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 GRIK2Q13002 908 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 GRB7Q14451 532 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 PTCHD3Q3KNS1 767 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 CCSMST1Q4G0I0 132 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 SLC30A9Q6PML9 568 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 ATG14Q6ZNE5 492 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 GOLGA7Q7Z5G4 137 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 MINDY1Q8N5J2 469 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 CCL4L1Q8NHW4 92 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 TRPC4APQ8TEL6 797 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 AGAP11Q8TF27 550 aa13.66□□□□□ -0.22
MSRA-201ENST00000317173 STON2Q8WXE9 905 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms