RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 NUDT2P50583 147 aa24.26■■□□□ 1.47
CDPF1-201ENST00000314567 STX5Q13190 355 aa24.26■■□□□ 1.47
CDPF1-201ENST00000314567 SRSF5Q13243 272 aaKnown RBP24.26■■□□□ 1.47
CDPF1-201ENST00000314567 GTF2H3Q13889 308 aa24.26■■□□□ 1.47
CDPF1-201ENST00000314567 TRMT5Q32P41 509 aaKnown RBP24.26■■□□□ 1.47
CDPF1-201ENST00000314567 MAMSTRQ6ZN01 415 aa24.26■■□□□ 1.47
CDPF1-201ENST00000314567 MILR1Q7Z6M3 343 aa24.26■■□□□ 1.47
CDPF1-201ENST00000314567 METTL6Q8TCB7 284 aa24.26■■□□□ 1.47
CDPF1-201ENST00000314567 SLC32A1Q9H598 525 aa24.26■■□□□ 1.47
CDPF1-201ENST00000314567 PRMT8Q9NR22 394 aaPredicted RBP24.26■■□□□ 1.47
CDPF1-201ENST00000314567 PHPT1Q9NRX4 125 aaPredicted RBP24.26■■□□□ 1.47
CDPF1-201ENST00000314567 TRPS1Q9UHF7 1281 aa24.26■■□□□ 1.47
CDPF1-201ENST00000314567 PRPF19Q9UMS4 504 aaKnown RBP24.26■■□□□ 1.47
CDPF1-201ENST00000314567 A0A088AWK7 358 aa24.25■■□□□ 1.47
CDPF1-201ENST00000314567 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.25■■□□□ 1.47
CDPF1-201ENST00000314567 CAPN1P07384 714 aa24.25■■□□□ 1.47
CDPF1-201ENST00000314567 EBLN1P0CF75 366 aa24.25■■□□□ 1.47
CDPF1-201ENST00000314567 MYCLP1P12525 358 aaPredicted RBP24.25■■□□□ 1.47
CDPF1-201ENST00000314567 TDGF1P13385 188 aa24.25■■□□□ 1.47
CDPF1-201ENST00000314567 HGFP14210 728 aa24.25■■□□□ 1.47
CDPF1-201ENST00000314567 TMEFF1Q8IYR6 380 aa24.25■■□□□ 1.47
CDPF1-201ENST00000314567 DEFB107AQ8IZN7 70 aa24.25■■□□□ 1.47
CDPF1-201ENST00000314567 TMEM145Q8NBT3 493 aa24.25■■□□□ 1.47
CDPF1-201ENST00000314567 HMGCLL1Q8TB92 370 aa24.25■■□□□ 1.47
CDPF1-201ENST00000314567 RCN3Q96D15 328 aa24.25■■□□□ 1.47
CDPF1-201ENST00000314567 KNL1Q8NG31 2342 aa24.25■■□□□ 1.47
CDPF1-201ENST00000314567 AIM2O14862 343 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 LAMTOR5O43504 91 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 VEGFDO43915 354 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 PSIP1O75475 530 aaKnown RBP24.24■■□□□ 1.47
CDPF1-201ENST00000314567 IDO1P14902 403 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 HMOX2P30519 316 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 AKT2P31751 481 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 CSTF1Q05048 431 aaKnown RBP24.24■■□□□ 1.47
CDPF1-201ENST00000314567 USP39Q53GS9 565 aaKnown RBP24.24■■□□□ 1.47
CDPF1-201ENST00000314567 AGKQ53H12 422 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 FAM219BQ5XKK7 198 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 C1orf210Q8IVY1 113 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 DENND6BQ8NEG7 585 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 CDK15Q96Q40 435 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 SLC25A23Q9BV35 468 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 GULP1Q9UBP9 304 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 SLC7A8Q9UHI5 535 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 LIN7AO14910 233 aaPredicted RBP24.24■■□□□ 1.47
CDPF1-201ENST00000314567 PEX11AO75192 247 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 WDR47O94967 919 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 TEAD1P28347 426 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 SLC6A12P48065 614 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 GRIK2Q13002 908 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 GRB7Q14451 532 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 KIF19Q2TAC6 998 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 PGM2L1Q6PCE3 622 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 LAYNQ6UX15 382 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 MBOAT1Q6ZNC8 495 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 GK5Q6ZS86 529 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 ARMCX6Q7L4S7 300 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 SLC22A15Q8IZD6 547 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 SPACA7Q96KW9 195 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 LINC00615Q96LM1 132 aaPredicted RBP24.24■■□□□ 1.47
CDPF1-201ENST00000314567 SLC6A18Q96N87 628 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 MOSPD1Q9UJG1 213 aa24.24■■□□□ 1.47
CDPF1-201ENST00000314567 A0A1W2PPC4 97 aa24.23■■□□□ 1.47
CDPF1-201ENST00000314567 MAP3K13O43283 966 aa24.23■■□□□ 1.47
CDPF1-201ENST00000314567 CEACAM5P06731 702 aa24.23■■□□□ 1.47
CDPF1-201ENST00000314567 SNRPB2P08579 225 aaKnown RBP24.23■■□□□ 1.47
CDPF1-201ENST00000314567 GDF5P43026 501 aa24.23■■□□□ 1.47
CDPF1-201ENST00000314567 TBL3Q12788 808 aaKnown RBP24.23■■□□□ 1.47
CDPF1-201ENST00000314567 KPNB1Q14974 876 aaKnown RBP24.23■■□□□ 1.47
CDPF1-201ENST00000314567 TCEA2Q15560 299 aa24.23■■□□□ 1.47
CDPF1-201ENST00000314567 ZNF658BQ4V348 819 aaPredicted RBP24.23■■□□□ 1.47
CDPF1-201ENST00000314567 DSELQ8IZU8 1212 aa24.23■■□□□ 1.47
CDPF1-201ENST00000314567 PGAM4Q8N0Y7 254 aa24.23■■□□□ 1.47
CDPF1-201ENST00000314567 MIER2Q8N344 545 aa24.23■■□□□ 1.47
CDPF1-201ENST00000314567 OR13H1Q8NG92 308 aa24.23■■□□□ 1.47
CDPF1-201ENST00000314567 FBXL8Q96CD0 374 aa24.23■■□□□ 1.47
CDPF1-201ENST00000314567 MRPL1Q9BYD6 325 aaKnown RBP24.23■■□□□ 1.47
CDPF1-201ENST00000314567 SLC23A2Q9UGH3 650 aa24.23■■□□□ 1.47
CDPF1-201ENST00000314567 PNMA8BQ9ULN7 279 aaPredicted RBP24.23■■□□□ 1.47
CDPF1-201ENST00000314567 GPR34Q9UPC5 381 aa24.23■■□□□ 1.47
CDPF1-201ENST00000314567 METTL12A8MUP2 240 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 PRAMEF26H0Y7S4 382 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 CATP04040 527 aaKnown RBP24.22■■□□□ 1.47
CDPF1-201ENST00000314567 CD1EP15812 388 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 GPX3P22352 226 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 MAP4P27816 1152 aaKnown RBP24.22■■□□□ 1.47
CDPF1-201ENST00000314567 PREPP48147 710 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 PFN3P60673 137 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 PLOD1Q02809 727 aaPredicted RBP24.22■■□□□ 1.47
CDPF1-201ENST00000314567 ART3Q13508 389 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 Q6ZSR6 202 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 C11orf96Q7Z7L8 435 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 CFAP61Q8NHU2 1237 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 CLPTM1LQ96KA5 538 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 HSPA12BQ96MM6 686 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 FOPNLQ96NB1 174 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 SLC29A3Q9BZD2 475 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 RNPEPL1Q9HAU8 725 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 FGF22Q9HCT0 170 aa24.22■■□□□ 1.47
CDPF1-201ENST00000314567 SDR39U1Q9NRG7 319 aaPredicted RBP24.22■■□□□ 1.47
CDPF1-201ENST00000314567 CCDC167Q9P0B6 97 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms