RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 MTA1Q13330 715 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 GRB14Q14449 540 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 LRIT3Q3SXY7 679 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 DEPDC1Q5TB30 811 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 FAM171A1Q5VUB5 890 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 GDF6Q6KF10 455 aaPredicted RBP13.15□□□□□ -0.3
CCDC13-201ENST00000310232 NKAPQ8N5F7 415 aaKnown RBP13.15□□□□□ -0.3
CCDC13-201ENST00000310232 OR8J3Q8NGG0 315 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 CDC26Q8NHZ8 85 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 BRI3BPQ8WY22 251 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 DNASE1L2Q92874 299 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 POPDC3Q9HBV1 291 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 ADARB2Q9NS39 739 aaKnown RBP13.15□□□□□ -0.3
CCDC13-201ENST00000310232 SPATA7Q9P0W8 599 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 SLC6A14Q9UN76 642 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 PRSS21Q9Y6M0 314 aa13.15□□□□□ -0.3
CCDC13-201ENST00000310232 COL4A4P53420 1690 aaPredicted RBP13.15□□□□□ -0.3
CCDC13-201ENST00000310232 LINC00854A0A1B0GVQ3 168 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 UNCXA6NJT0 531 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 SLC22A1O15245 554 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 FFAR2O15552 330 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 GADD45AP24522 165 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 AKT1P31749 480 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 ILF2Q12905 390 aaKnown RBP13.14□□□□□ -0.31
CCDC13-201ENST00000310232 TAF10Q12962 218 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 RUNDC3AQ59EK9 446 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 DOK6Q6PKX4 331 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 AFTPHQ6ULP2 937 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 FAM151BQ6UXP7 276 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 ARMC8Q8IUR7 673 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 TTC29Q8NA56 475 aaPredicted RBP13.14□□□□□ -0.31
CCDC13-201ENST00000310232 GIPC2Q8TF65 315 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 C1orf74Q96LT6 269 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 CIPCQ9C0C6 399 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 RUBCNLQ9H714 662 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 C14orf119Q9NWQ9 140 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 USE1Q9NZ43 259 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 OPTCQ9UBM4 332 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 ERVK-11Q9UQG0 969 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 SNPHO15079 494 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 ALOX12P18054 663 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 CLK1P49759 484 aaKnown RBP13.14□□□□□ -0.31
CCDC13-201ENST00000310232 CLCN7P51798 805 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 CYP27C1Q4G0S4 372 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 UBE2UQ5VVX9 321 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 EBPLQ9BY08 206 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 TP63Q9H3D4 680 aaPredicted RBP13.14□□□□□ -0.31
CCDC13-201ENST00000310232 FBXO8Q9NRD0 319 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 PADI3Q9ULW8 664 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 TMED5Q9Y3A6 229 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 ORC6Q9Y5N6 252 aa13.14□□□□□ -0.31
CCDC13-201ENST00000310232 HAS3O00219 553 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 WBP4O75554 376 aaKnown RBP13.13□□□□□ -0.31
CCDC13-201ENST00000310232 TWF1Q12792 350 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 PCBP1Q15365 356 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCDC13-201ENST00000310232 SPATS1Q496A3 300 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 GPR149Q86SP6 731 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 SVOPLQ8N434 492 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 RHOXF1Q8NHV9 184 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 FBXO32Q969P5 355 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 Q96MT0 163 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 KCNC2Q96PR1 638 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 C1QTNF3Q9BXJ4 246 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 ROGDIQ9GZN7 287 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 PDFQ9HBH1 243 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 HCSTQ9UBK5 93 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 ANGPTL3Q9Y5C1 460 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 CCDC159P0C7I6 412 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 BCKDHAP12694 445 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 GKP32189 559 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 ST13P50502 369 aaKnown RBP13.13□□□□□ -0.31
CCDC13-201ENST00000310232 COPZ1P61923 177 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 ARMC12Q5T9G4 340 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 MON1AQ86VX9 555 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 LRRC49Q8IUZ0 686 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 CACTIN-AS1Q8N1I8 211 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 THEM5Q8N1Q8 247 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 ATG16L2Q8NAA4 619 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 S100ZQ8WXG8 99 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 PYURFQ96I23 114 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 REXO5Q96IC2 774 aaKnown RBP13.13□□□□□ -0.31
CCDC13-201ENST00000310232 TPD52L3Q96J77 140 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 CCDC115Q96NT0 180 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 ADAM2Q99965 735 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 CINPQ9BW66 212 aaPredicted RBP13.13□□□□□ -0.31
CCDC13-201ENST00000310232 OR51E2Q9H255 320 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 DUSP21Q9H596 190 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 SERHLQ9NQF3 203 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 TMEM184CQ9NVA4 438 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 PPT2Q9UMR5 302 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 ZFP37Q9Y6Q3 630 aaPredicted RBP13.13□□□□□ -0.31
CCDC13-201ENST00000310232 PCM1Q15154 2024 aa13.13□□□□□ -0.31
CCDC13-201ENST00000310232 STX7O15400 261 aaKnown RBP13.12□□□□□ -0.31
CCDC13-201ENST00000310232 SLC16A6O15403 523 aa13.12□□□□□ -0.31
CCDC13-201ENST00000310232 RGS10O43665 173 aa13.12□□□□□ -0.31
CCDC13-201ENST00000310232 ZNF865P0CJ78 1059 aaPredicted RBP13.12□□□□□ -0.31
CCDC13-201ENST00000310232 COL6A1P12109 1028 aa13.12□□□□□ -0.31
CCDC13-201ENST00000310232 DOC2BQ14184 412 aa13.12□□□□□ -0.31
CCDC13-201ENST00000310232 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC13-201ENST00000310232 OR4F3Q6IEY1 312 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms