RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TAF4O00268 1085 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 SAP18O00422 153 aaKnown RBP15.6■□□□□ 0.09
USP42-201ENST00000306177 PLOD3O60568 738 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 MTX2O75431 263 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 TGFBR2P37173 567 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 SLC13A2Q13183 592 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 LRRC32Q14392 662 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 CAPSLQ8WWF8 208 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 PIWIL1Q96J94 861 aaKnown RBP15.6■□□□□ 0.09
USP42-201ENST00000306177 DERL2Q9GZP9 239 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 PCDHAC1Q9H158 963 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 ING4Q9UNL4 249 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 GPC6Q9Y625 555 aaPredicted RBP15.6■□□□□ 0.09
USP42-201ENST00000306177 RGPD5Q99666 1765 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 EDDM13A0A1B0GTR0 161 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 AP2A2O94973 939 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 CDH1P12830 882 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 RFC2P35250 354 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 NCBP2P52298 156 aaKnown RBP eCLIP15.6■□□□□ 0.091e-6■□□□□ 9.8
USP42-201ENST00000306177 TNFAIP8L2Q6P589 184 aaPredicted RBP15.6■□□□□ 0.09
USP42-201ENST00000306177 ATG14Q6ZNE5 492 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 OMA1Q96E52 524 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 GAL3ST4Q96RP7 486 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 PRRG4Q9BZD6 226 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 EBF3Q9H4W6 596 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 CARS2Q9HA77 564 aaKnown RBP15.6■□□□□ 0.09
USP42-201ENST00000306177 C11orf16Q9NQ32 467 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 DNAAF2Q9NVR5 837 aaKnown RBP15.6■□□□□ 0.09
USP42-201ENST00000306177 DNAJB4Q9UDY4 337 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 ZDHHC2Q9UIJ5 367 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 PHF11Q9UIL8 331 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 WBP11Q9Y2W2 641 aaKnown RBP15.6■□□□□ 0.09
USP42-201ENST00000306177 UPK3BL1B0FP48 263 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 UPK3BL2E5RIL1 263 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 STC1P52823 247 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 BLMHQ13867 455 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 C2orf27AQ580R0 203 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 XKR4Q5GH76 650 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 GALPQ9UBC7 116 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 PAPSS2O95340 614 aaPredicted RBP15.6■□□□□ 0.09
USP42-201ENST00000306177 MPIP34949 423 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 FAUP35544 74 aaKnown RBP15.6■□□□□ 0.09
USP42-201ENST00000306177 SCARB2Q14108 478 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 KLHL24Q6TFL4 600 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 LRRTM4Q86VH4 590 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 CILP2Q8IUL8 1156 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 CMTM8Q8IZV2 173 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 OVCA2Q8WZ82 227 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 SIGLEC10Q96LC7 697 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 COPS7AQ9UBW8 275 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 SNX7Q9UNH6 387 aa15.6■□□□□ 0.09
USP42-201ENST00000306177 CCNHP51946 323 aaPredicted RBP15.59■□□□□ 0.09
USP42-201ENST00000306177 RPL26P61254 145 aaKnown RBP15.59■□□□□ 0.09
USP42-201ENST00000306177 PDE12Q6L8Q7 609 aaKnown RBP15.59■□□□□ 0.09
USP42-201ENST00000306177 CXorf57Q6NSI4 855 aaKnown RBP15.59■□□□□ 0.09
USP42-201ENST00000306177 CXorf21Q9HAI6 301 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 DGKBQ9Y6T7 804 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 ARHGEF33A8MVX0 844 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 STX16-NPEPL1H3BU86 382 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 CDC7O00311 574 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 STX16O14662 325 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 CNTN5O94779 1100 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 ALPPP05187 535 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 GDI1P31150 447 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 MNDAP41218 407 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 MASP1P48740 699 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 BICRALQ6AI39 1079 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 MAMDC4Q6UXC1 1216 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 RNF19BQ6ZMZ0 732 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 LAPTM4BQ86VI4 370 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 NAT14Q8WUY8 206 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 DUXAA6NLW8 204 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 GMFGO60234 142 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 HCN1O60741 890 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 SOD2P04179 222 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 MTHFD1P11586 935 aaKnown RBP15.59■□□□□ 0.09
USP42-201ENST00000306177 OLIG2Q13516 323 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 ENPP7Q6UWV6 458 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 SERINC5Q86VE9 423 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 ART5Q96L15 291 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 C1orf74Q96LT6 269 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 ELOVL2Q9NXB9 296 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 MKL2Q9ULH7 1088 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 NOBOXO60393 691 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 IL12BP29460 328 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 TIE1P35590 1138 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 CLCN4P51793 760 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 IL18Q14116 193 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 C22orf39Q6P5X5 142 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 RGMAQ96B86 450 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 ZNF317Q96PQ6 595 aaPredicted RBP15.59■□□□□ 0.09
USP42-201ENST00000306177 CGREF1Q99674 301 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 TAPBPLQ9BX59 468 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 SLC22A14Q9Y267 594 aa15.59■□□□□ 0.09
USP42-201ENST00000306177 AIREO43918 545 aa15.58■□□□□ 0.09
USP42-201ENST00000306177 TGFB1P01137 390 aa15.58■□□□□ 0.09
USP42-201ENST00000306177 LRRC66Q68CR7 880 aa15.58■□□□□ 0.09
USP42-201ENST00000306177 SMYD5Q6GMV2 418 aa15.58■□□□□ 0.09
USP42-201ENST00000306177 RELL1Q8IUW5 271 aa15.58■□□□□ 0.09
USP42-201ENST00000306177 TRIB2Q92519 343 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms