RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ANGPTL8Q6UXH0 198 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 SPATA2LQ8IUW3 424 aaPredicted RBP14.34□□□□□ -0.11
COL6A2-201ENST00000300527 STX19Q8N4C7 294 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 NKAPQ8N5F7 415 aaKnown RBP14.34□□□□□ -0.11
COL6A2-201ENST00000300527 UBASH3BQ8TF42 649 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 IGSF8Q969P0 613 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 CENPOQ9BU64 300 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 POLR1EQ9GZS1 481 aaKnown RBP14.34□□□□□ -0.11
COL6A2-201ENST00000300527 MMP27Q9H306 513 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 DUSP21Q9H596 190 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 TRPV5Q9NQA5 729 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 ABCC13Q9NSE7 274 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 MED16Q9Y2X0 877 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 PCDHGC4Q9Y5F7 938 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 PTCH2Q9Y6C5 1203 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 DNAJC25-GNG10A0A024R161 153 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 METTL15A6NJ78 407 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 SAGE2PA6NJ88 616 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 TLL1O43897 1013 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 CPSF4O95639 269 aaKnown RBP14.34□□□□□ -0.11
COL6A2-201ENST00000300527 PEX11BO96011 259 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 SERPINF2P08697 491 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 CRISP3P54108 245 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 MLLT6P55198 1093 aaPredicted RBP14.34□□□□□ -0.11
COL6A2-201ENST00000300527 ZNF181Q2M3W8 571 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 BRMS1LQ5PSV4 323 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 OR2T5Q6IEZ7 315 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 PDE12Q6L8Q7 609 aaKnown RBP14.34□□□□□ -0.11
COL6A2-201ENST00000300527 OR2T29Q8NH02 315 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 NECTIN4Q96NY8 510 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 ZYG11BQ9C0D3 744 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 WWOXQ9NZC7 414 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 OSGIN1Q9UJX0 560 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 ZNF490Q9ULM2 529 aaPredicted RBP14.34□□□□□ -0.11
COL6A2-201ENST00000300527 PCDHGB6Q9Y5F9 930 aa14.34□□□□□ -0.11
COL6A2-201ENST00000300527 PCDHGA12O60330 932 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 CHRM5P08912 532 aaPredicted RBP14.33□□□□□ -0.12
COL6A2-201ENST00000300527 CYP2C18P33260 490 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 TBX4P57082 545 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 GRIK2Q13002 908 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 CCDC58Q4VC31 144 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 NRARPQ7Z6K4 114 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 FAM217AQ8IXS0 508 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 AADATQ8N5Z0 425 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 BRSK1Q8TDC3 778 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 SKA2Q8WVK7 121 aaPredicted RBP14.33□□□□□ -0.12
COL6A2-201ENST00000300527 TTPALQ9BTX7 342 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 GPR83Q9NYM4 423 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 SLC16A6O15403 523 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 STSP08842 583 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 CHRNB1P11230 501 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 POU2F1P14859 743 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 HMGB2P26583 209 aaKnown RBP14.33□□□□□ -0.12
COL6A2-201ENST00000300527 S100A3P33764 101 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 TGFBR2P37173 567 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 MED22Q15528 200 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 NEK5Q6P3R8 708 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 MIA3Q5JRA6 1907 aa14.33□□□□□ -0.12
COL6A2-201ENST00000300527 ISPDA4D126 451 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 M0QX08 132 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 DNAJB5O75953 348 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 TBRG1Q3YBR2 411 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 AGAP6Q5VW22 663 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 MSANTD2Q6P1R3 559 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 MBOAT1Q6ZNC8 495 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 AGAP4Q96P64 663 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 IRF2BPLQ9H1B7 796 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 REEP1Q9H902 201 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 AGO1Q9UL18 857 aaKnown RBP14.32□□□□□ -0.12
COL6A2-201ENST00000300527 SMIM30A4D0T7 59 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 OR2A25A4D2G3 310 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 KMOO15229 486 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 CDKN2CP42773 168 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 ZXDBP98169 803 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 CDC20Q12834 499 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 ZNF621Q6ZSS3 439 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 SCD5Q86SK9 330 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 OR7D4Q8NG98 312 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 OR10T2Q8NGX3 314 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 SH3GL1Q99961 368 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 HEBP1Q9NRV9 189 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 OSER1Q9NX31 292 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 SCAMP3O14828 347 aaKnown RBP14.32□□□□□ -0.12
COL6A2-201ENST00000300527 ULK1O75385 1050 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 GLUD1P00367 558 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 NPPAP01160 153 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 FGF1P05230 155 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 VLDLRP98155 873 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 BEX3Q00994 111 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 CD83Q01151 205 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 SUSD1Q6UWL2 747 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 TRIM48Q8IWZ4 208 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 PPP3R2Q96LZ3 170 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 ZNF382Q96SR6 550 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 MMP28Q9H239 520 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 LRTM1Q9HBL6 345 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 LATS2Q9NRM7 1088 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 RAD18Q9NS91 495 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 NAALAD2Q9Y3Q0 740 aa14.32□□□□□ -0.12
COL6A2-201ENST00000300527 DNMT3AQ9Y6K1 912 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms