RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 KAZALD1Q96I82 304 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 ATXN10Q9UBB4 475 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 FAM237AA0A1B0GTK4 181 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 TCRBV9S1A1TA0A576 114 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 LATS1O95835 1130 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 ABCG1P45844 678 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 TEX44Q53QW1 395 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 C15orf52Q6ZUT6 534 aaKnown RBP11.85□□□□□ -0.51
PCF11-201ENST00000298281 IRGQQ8WZA9 623 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 TUBG2Q9NRH3 451 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 EGFL7Q9UHF1 273 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 ZNF451Q9Y4E5 1061 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 CLCA1A8K7I4 914 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 FAM155AB1AL88 458 aaPredicted RBP11.85□□□□□ -0.51
PCF11-201ENST00000298281 ADM5C9JUS6 153 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 NDST3O95803 873 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 EPHA3P29320 983 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 CTBP1Q13363 440 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 PDPRQ8NCN5 879 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 PROKR2Q8NFJ6 384 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 PPTC7Q8NI37 304 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 BORCS5Q969J3 196 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 ARMC5Q96C12 935 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 EPYCQ99645 322 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 ARGFXA6NJG6 315 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 FKTNO75072 461 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 STK16O75716 305 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 CCNKO75909 580 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 PIRTP0C851 137 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 GABRR2P28476 465 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 CRHR1P34998 444 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 CAPSQ13938 189 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 TMEM44Q2T9K0 475 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 ATAT1Q5SQI0 421 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 MFSD8Q8NHS3 518 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 SPATA22Q8NHS9 363 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 NDC1Q9BTX1 674 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 HIPK2Q9H2X6 1198 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 ZNF490Q9ULM2 529 aaPredicted RBP11.85□□□□□ -0.51
PCF11-201ENST00000298281 R3HDM2Q9Y2K5 976 aaKnown RBP11.85□□□□□ -0.51
PCF11-201ENST00000298281 ROBO3Q96MS0 1386 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 A0A0J9YYE9 177 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 GLYATL1P3A0A0U1RQE8 302 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 PAGE1O75459 146 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 DLG4P78352 724 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 TARBP2Q15633 366 aaKnown RBP11.85□□□□□ -0.51
PCF11-201ENST00000298281 PDSS1Q5T2R2 415 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 SLC43A2Q8N370 569 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 MIPEPQ99797 713 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 POLMQ9NP87 494 aaPredicted RBP11.85□□□□□ -0.51
PCF11-201ENST00000298281 ARHGAP23Q9P227 1491 aa11.85□□□□□ -0.51
PCF11-201ENST00000298281 ADAMTS3O15072 1205 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 WFS1O76024 890 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 SPAM1P38567 509 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 CUZD1Q86UP6 607 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 SDHAF3Q9NRP4 125 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 POLR3HQ9Y535 204 aaPredicted RBP11.84□□□□□ -0.51
PCF11-201ENST00000298281 ASTN1O14525 1302 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 ADAMDEC1O15204 470 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 CLDN9O95484 217 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 ADRB2P07550 413 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 GLUD2P49448 558 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 DGKEP52429 567 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 OR12D2P58182 307 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 BATFQ16520 125 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 PQLC1Q8N2U9 271 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 TSEN2Q8NCE0 465 aaKnown RBP11.84□□□□□ -0.51
PCF11-201ENST00000298281 HERVK_113Q902F9 699 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 P2RY11Q96G91 374 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 IL20RAQ9UHF4 553 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 DNMT3AQ9Y6K1 912 aaPredicted RBP11.84□□□□□ -0.51
PCF11-201ENST00000298281 DCCP43146 1447 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 RIC1Q4ADV7 1423 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 NPIPA5E9PKD4 350 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 B3GALT2O43825 422 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 B4GALT4O60513 344 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 CLRN1P58418 232 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 TTMPQ5BVD1 217 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 EIF5AL1Q6IS14 154 aaKnown RBP11.84□□□□□ -0.51
PCF11-201ENST00000298281 STOML3Q8TAV4 291 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 NPIPA1Q9UND3 350 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 LOXHD1Q8IVV2 1947 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 A6NLC8 198 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 RAD51DO75771 328 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 FASLGP48023 281 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 MAPK12P53778 367 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 MTX3Q5HYI7 312 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 GPR142Q7Z601 462 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 DNAJB7Q7Z6W7 309 aaPredicted RBP11.84□□□□□ -0.51
PCF11-201ENST00000298281 RAB43Q86YS6 212 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 THAP6Q8TBB0 222 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 DQX1Q8TE96 717 aaKnown RBP11.84□□□□□ -0.51
PCF11-201ENST00000298281 SLC38A4Q969I6 547 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 TDP1Q9NUW8 608 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 VWDEQ8N2E2 1590 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 A6NCN8 305 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 PITPNM1O00562 1244 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 MAP2K7O14733 419 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 ENTPD5O75356 428 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 FOLH1Q04609 750 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms