RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SNRPD1P62314 119 aaKnown RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 HMBOX1Q6NT76 420 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 HJURPQ8NCD3 748 aaPredicted RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 PHC3Q8NDX5 983 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 IMP4Q96G21 291 aaKnown RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 IL12RB2Q99665 862 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 SLC29A1Q99808 456 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 KPNA5O15131 536 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 AXIN1O15169 862 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 FFAR2O15552 330 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 KERAO60938 352 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 OR5F1O95221 314 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 OGNP20774 298 aaKnown RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 CCND3P30281 292 aaPredicted RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 TIE1P35590 1138 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 CDKN1CP49918 316 aaPredicted RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 FOXA1P55317 472 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 ERVK-8P63133 956 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 OR4D1Q15615 310 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 SMYD5Q6GMV2 418 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 GPR153Q6NV75 609 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 RANBP10Q6VN20 620 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 STX12Q86Y82 276 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 AURKBQ96GD4 344 aaPredicted RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 MTERF1Q99551 399 aaKnown RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 BEX2Q9BXY8 128 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 TRIT1Q9H3H1 467 aaKnown RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 PCDH10Q9P2E7 1040 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 EIF3KQ9UBQ5 218 aaKnown RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 GOLGB1Q14789 3259 aaKnown RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 ANKDD1BA6NHY2 528 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 SLC28A1O00337 649 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 ORC5O43913 435 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 KHDRBS3O75525 346 aaKnown RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 SLC9A3P48764 834 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 TAF1AQ15573 450 aaPredicted RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 LCN1P1Q5VSP4 162 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 CCDC28AQ8IWP9 274 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 SLC13A3Q8WWT9 602 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 TMIGD2Q96BF3 282 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 ISOC1Q96CN7 298 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 TMEM246Q9BRR3 403 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 ARHGAP39Q9C0H5 1083 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 RNF208Q9H0X6 261 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 KRCC1Q9NPI7 259 aaPredicted RBP12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 RDH8Q9NYR8 311 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 GABRQQ9UN88 632 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 CPQQ9Y646 472 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 GJB5O95377 273 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 CSF2P04141 144 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 FKBP1BP68106 108 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 CDKL1Q00532 357 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 CACNG1Q06432 222 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 CCDC157Q569K6 752 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 MAMDC4Q6UXC1 1216 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 ZBTB2Q8N680 514 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 C7orf57Q8NEG2 295 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 SLITRK2Q9H156 845 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 CD320Q9NPF0 282 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 COQ3Q9NZJ6 369 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 TBC1D24Q9ULP9 559 aa12.29□□□□□ -0.44
SLC6A1-201ENST00000287766 PLK4O00444 970 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 GPR39O43194 453 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 EPORP19235 508 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 TNNI3P19429 210 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 GNG2P59768 71 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 SERINC3Q13530 473 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 PTGR1Q14914 329 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 CES4AQ5XG92 561 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 ISCA2Q86U28 154 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 ITIH5Q86UX2 942 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 SLC15A3Q8IY34 581 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 OR4F6Q8NGB9 312 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 GPR62Q9BZJ7 368 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 INTS7Q9NVH2 962 aaKnown RBP12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 NUP50Q9UKX7 468 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 RABL2BQ9UNT1 228 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 ISPDA4D126 451 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 ANKRD66B4E2M5 251 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 SNAP29O95721 258 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 IL7RP16871 459 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 MAGEA3P43357 314 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 LEPRP48357 1165 aaKnown RBP12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 DCDC1P59894 354 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 NPTX1Q15818 432 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 ERMP1Q7Z2K6 904 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 SCD5Q86SK9 330 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 PHACTR4Q8IZ21 702 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 TTC29Q8NA56 475 aaPredicted RBP12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 TRPV3Q8NET8 790 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 TMBIM1Q969X1 311 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 PTERQ96BW5 349 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 FUBP3Q96I24 572 aaKnown RBP eCLIP12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 ZSCAN5AQ9BUG6 496 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 BRD9Q9H8M2 597 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 SMURF2Q9HAU4 748 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 VPS4AQ9UN37 437 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 SCML2Q9UQR0 700 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 UPK3BL1B0FP48 263 aa12.28□□□□□ -0.44
SLC6A1-201ENST00000287766 UPK3BL2E5RIL1 263 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms