RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ARL15Q9NXU5 204 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 CRLS1Q9UJA2 301 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 DHRS7Q9Y394 339 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 SH3BP1Q9Y3L3 701 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 PTPRDP23468 1912 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 FNDC1Q4ZHG4 1894 aaPredicted RBP16.4■□□□□ 0.22
SQLE-201ENST00000265896 KDELR3O43731 214 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 F11P03951 625 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 OPN1SWP03999 348 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 BMP4P12644 408 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 TP53BP2Q13625 1128 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 BOP1Q14137 746 aaKnown RBP16.4■□□□□ 0.22
SQLE-201ENST00000265896 TAF12Q16514 161 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 ZXDCQ2QGD7 858 aaPredicted RBP16.4■□□□□ 0.22
SQLE-201ENST00000265896 CACHD1Q5VU97 1274 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 CADM3Q8N126 398 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 Q8N9G6 341 aaPredicted RBP16.4■□□□□ 0.22
SQLE-201ENST00000265896 CHPT1Q8WUD6 406 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 RBM4BQ9BQ04 359 aaKnown RBP16.4■□□□□ 0.22
SQLE-201ENST00000265896 RBM4Q9BWF3 364 aaKnown RBP16.4■□□□□ 0.22
SQLE-201ENST00000265896 ROGDIQ9GZN7 287 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 KLHL25Q9H0H3 589 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 MAGEH1Q9H213 219 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 KAT8Q9H7Z6 458 aaKnown RBP16.4■□□□□ 0.22
SQLE-201ENST00000265896 MARCH7Q9H992 704 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 IL26Q9NPH9 171 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 WDR70Q9NW82 654 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 IL17CQ9P0M4 197 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 SLCO3A1Q9UIG8 710 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 DNMT3LQ9UJW3 386 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 PPT2Q9UMR5 302 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 ERVK-11Q9UQG0 969 aa16.4■□□□□ 0.22
SQLE-201ENST00000265896 CAB39Q9Y376 341 aaPredicted RBP16.4■□□□□ 0.22
SQLE-201ENST00000265896 A0A096LPI6 279 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 C16orf96A6NNT2 1141 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 ZNF99A8MXY4 864 aaPredicted RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 CLDN25C9JDP6 229 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 IFRD1O00458 451 aaPredicted RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 RGS14O43566 566 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 C21orf33P30042 268 aaPredicted RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 TMED10P49755 219 aaKnown RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 DAPP51397 102 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 GRSF1Q12849 480 aaKnown RBP eCLIP16.39■□□□□ 0.21
SQLE-201ENST00000265896 PDE12Q6L8Q7 609 aaKnown RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 EFL1Q7Z2Z2 1120 aaKnown RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 TMCO2Q7Z6W1 182 aaPredicted RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 APCDD1Q8J025 514 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 BCL7CQ8WUZ0 217 aaPredicted RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 TRUB1Q8WWH5 349 aaKnown RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 HDAC2Q92769 488 aaKnown RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 MTERF1Q99551 399 aaKnown RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 CHD7Q9P2D1 2997 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 ZNF229Q9UJW7 825 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 BLOC1S6Q9UL45 172 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 CLEC4EQ9ULY5 219 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 SLC45A1Q9Y2W3 748 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 IGLV3-27P01718 113 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 ESR1P03372 595 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 GBAP04062 536 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 ZNF12P17014 697 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 CD6P30203 668 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 S100A3P33764 101 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 PTGER3P43115 390 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 SLC11A1P49279 550 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 CLK3P49761 638 aaKnown RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 VLDLRP98155 873 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 INAVAQ3KP66 663 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 ZNF648Q5T619 568 aaPredicted RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 SLC7A5P1Q8MH63 180 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 ATP13A3Q9H7F0 1226 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 ZBTB20Q9HC78 741 aaPredicted RBP16.39■□□□□ 0.21
SQLE-201ENST00000265896 NUDT4Q9NZJ9 180 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 C3orf18Q9UK00 162 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 ORC6Q9Y5N6 252 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 SZT2Q5T011 3432 aa16.39■□□□□ 0.21
SQLE-201ENST00000265896 KDM1AO60341 852 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 STC2O76061 302 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 RECQL5O94762 991 aaPredicted RBP16.38■□□□□ 0.21
SQLE-201ENST00000265896 CKBP12277 381 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 POU2F1P14859 743 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 HOXB8P17481 243 aaPredicted RBP16.38■□□□□ 0.21
SQLE-201ENST00000265896 PCMT1P22061 227 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 DSC1Q08554 894 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 GPR162Q16538 588 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 UAP1L1Q3KQV9 507 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 IRAK1BP1Q5VVH5 260 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 CXorf57Q6NSI4 855 aaKnown RBP16.38■□□□□ 0.21
SQLE-201ENST00000265896 ADAMTSL2Q86TH1 951 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 ZCCHC7Q8N3Z6 543 aaKnown RBP16.38■□□□□ 0.21
SQLE-201ENST00000265896 BEND7Q8N7W2 519 aaPredicted RBP16.38■□□□□ 0.21
SQLE-201ENST00000265896 PROX1Q92786 737 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 FAM126AQ9BYI3 521 aaPredicted RBP16.38■□□□□ 0.21
SQLE-201ENST00000265896 SIRT5Q9NXA8 310 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 ENPP5Q9UJA9 477 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 GMPPBQ9Y5P6 360 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 LOC100506127A0A0U1RQW1 187 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 MANBAO00462 879 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 FAM20BO75063 409 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 RCVRNP35243 200 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 CCL23P55773 120 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms