RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 PDPRQ8NCN5 879 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 DEFB124Q8NES8 71 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 CFAP61Q8NHU2 1237 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 ZNF480Q8WV37 535 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 SKA2Q8WVK7 121 aaPredicted RBP13.83□□□□□ -0.2
SSBP1-201ENST00000265304 CCDC3Q9BQI4 270 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 HGH1Q9BTY7 390 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 TBC1D10AQ9BXI6 508 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 CHRNA10Q9GZZ6 450 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 VPS11Q9H270 941 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 LRRN3Q9H3W5 708 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 ZNF358Q9NW07 568 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 KCNK4Q9NYG8 393 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 LNPEPQ9UIQ6 1025 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 PTBP2Q9UKA9 531 aaKnown RBP13.83□□□□□ -0.2
SSBP1-201ENST00000265304 GRID1Q9ULK0 1009 aa13.83□□□□□ -0.2
SSBP1-201ENST00000265304 MN1Q10571 1320 aaPredicted RBP13.83□□□□□ -0.2
SSBP1-201ENST00000265304 A0A1W2PPV9 198 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 OR5K3A6NET4 321 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 SMIM23A6NLE4 172 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 ZNF839A8K0R7 811 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 FOXO6A8MYZ6 492 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 BTN3A3O00478 584 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 TOX3O15405 576 aaPredicted RBP13.82□□□□□ -0.2
SSBP1-201ENST00000265304 SASH3O75995 380 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 KCNK5O95279 499 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 CPNE6O95741 557 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 PROS1P07225 676 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 HIST1H2AGP0C0S8 130 aaPredicted RBP13.82□□□□□ -0.2
SSBP1-201ENST00000265304 MYZAPP0CAP1 466 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 HIST1H2ADP20671 130 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 MAP4P27816 1152 aaKnown RBP13.82□□□□□ -0.2
SSBP1-201ENST00000265304 IMPA1P29218 277 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 BDKRB1P46663 353 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 CAPZBP47756 277 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 KPNA2P52292 529 aaKnown RBP13.82□□□□□ -0.2
SSBP1-201ENST00000265304 PCDH1Q08174 1060 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 KIR2DS3Q14952 304 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 AGBL2Q5U5Z8 902 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 KLC3Q6P597 504 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 CDHR3Q6ZTQ4 885 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 GPSM1Q86YR5 675 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 OR56A3Q8NH54 315 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 OR10G6Q8NH81 332 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 ATL1Q8WXF7 558 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 RHBDF1Q96CC6 855 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 HIST1H2AHQ96KK5 128 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 CD180Q99467 661 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 HIST1H2AJQ99878 128 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 H2AFJQ9BTM1 129 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 SGPP1Q9BX95 441 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 PITPNM3Q9BZ71 974 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 MRPL46Q9H2W6 279 aaKnown RBP13.82□□□□□ -0.2
SSBP1-201ENST00000265304 SRMSQ9H3Y6 488 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 TMEM216Q9P0N5 145 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 STOX2Q9P2F5 926 aaPredicted RBP13.82□□□□□ -0.2
SSBP1-201ENST00000265304 EMCNQ9ULC0 261 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 TMCO1Q9UM00 188 aa13.82□□□□□ -0.2
SSBP1-201ENST00000265304 NPEPPSL1A6NEC2 478 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 SYCE1LA8MT33 242 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 DYNC1I1O14576 645 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 GLRA3O75311 464 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 RFPL3O75679 317 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 TOP3BO95985 862 aaKnown RBP13.81□□□□□ -0.2
SSBP1-201ENST00000265304 ALDH4A1P30038 563 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 SLC6A12P48065 614 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 PNLIPRP1P54315 467 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 CCL7P80098 99 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 ZFP36L1Q07352 338 aaKnown RBP13.81□□□□□ -0.2
SSBP1-201ENST00000265304 SULT1C3Q6IMI6 304 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 TMEM71Q6P5X7 295 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 AGTRAPQ6RW13 159 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 ZNF574Q6ZN55 896 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-201ENST00000265304 TCAIMQ8N3R3 496 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 LMNTD1Q8N9Z9 388 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 OR4E2Q8NGC2 313 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 OR4D9Q8NGE8 314 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 OR2A1Q8NGT9 310 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 UBTD2Q8WUN7 234 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 SMPDL3AQ92484 453 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 RSC1A1Q92681 617 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 SLC22A18Q96BI1 424 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 GRAMD1AQ96CP6 724 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 C1QTNF3Q9BXJ4 246 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 STMN4Q9H169 189 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-201ENST00000265304 ALG9Q9H6U8 611 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 PCMTD2Q9NV79 361 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 ARL15Q9NXU5 204 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 NUDT4Q9NZJ9 180 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 POMT2Q9UKY4 750 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 TDRKHQ9Y2W6 561 aaKnown RBP13.81□□□□□ -0.2
SSBP1-201ENST00000265304 PLLPQ9Y342 182 aa13.81□□□□□ -0.2
SSBP1-201ENST00000265304 CEP295Q9C0D2 2601 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 AHCTF1Q8WYP5 2266 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 GOLGA8RI6L899 631 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 TAPBPO15533 448 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 DUX1O43812 170 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 PLIN3O60664 434 aa13.8□□□□□ -0.2
SSBP1-201ENST00000265304 IPO13O94829 963 aaKnown RBP13.8□□□□□ -0.2
SSBP1-201ENST00000265304 PROCP04070 461 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms