RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 OR2Y1Q8NGV0 311 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 OR5K2Q8NHB8 316 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 PROKR1Q8TCW9 393 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 SSC4DQ8WTU2 575 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 BARD1Q99728 777 aaKnown RBP9.94□□□□□ -0.82
VPS50-201ENST00000251739 C17orf62Q9BQA9 187 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 MENTQ9BUN1 341 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 TRIM5Q9C035 493 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 LRRC4CQ9HCJ2 640 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 SLC22A11Q9NSA0 550 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 LUZP4Q9P127 313 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 RIMKLBQ9ULI2 386 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 PADI2Q9Y2J8 665 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 APCP25054 2843 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 CSMD1Q96PZ7 3565 aa9.94□□□□□ -0.82
VPS50-201ENST00000251739 TCRBV7S2A1N4TA0A589 114 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 CCDC162PA2VCL2 907 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 WIPF3A6NGB9 483 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 OR51F1A6NGY5 319 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 ZSCAN9O15535 394 aaPredicted RBP9.93□□□□□ -0.82
VPS50-201ENST00000251739 OR2B3O76000 313 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 ONECUT2O95948 504 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 FTH1P02794 183 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 UMODP07911 640 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 PKLRP30613 574 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 PLOD1Q02809 727 aaPredicted RBP9.93□□□□□ -0.82
VPS50-201ENST00000251739 MRPL49Q13405 166 aaKnown RBP9.93□□□□□ -0.82
VPS50-201ENST00000251739 GRB7Q14451 532 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 SSPNQ14714 243 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 MYBPC3Q14896 1274 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 KIR2DS3Q14952 304 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 DCAF10Q5QP82 559 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 ZNF449Q6P9G9 518 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 ZNF534Q76KX8 674 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 TAS2R42Q7RTR8 314 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 TMTC1Q8IUR5 882 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 GPR135Q8IZ08 494 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 ELMO1Q92556 727 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 INPP5DQ92835 1189 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 LRRC45Q96CN5 670 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 SPRTNQ9H040 489 aaPredicted RBP9.93□□□□□ -0.82
VPS50-201ENST00000251739 PIH1D1Q9NWS0 290 aaKnown RBP9.93□□□□□ -0.82
VPS50-201ENST00000251739 SMARCAL1Q9NZC9 954 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 GMPR2Q9P2T1 348 aaKnown RBP9.93□□□□□ -0.82
VPS50-201ENST00000251739 POLG2Q9UHN1 485 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 SRPK3Q9UPE1 567 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 CDYLQ9Y232 598 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 ASF1AQ9Y294 204 aa9.93□□□□□ -0.82
VPS50-201ENST00000251739 A6NL46 340 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 ERI2A8K979 691 aaKnown RBP9.92□□□□□ -0.82
VPS50-201ENST00000251739 MIF4GDA9UHW6 222 aaKnown RBP9.92□□□□□ -0.82
VPS50-201ENST00000251739 OR1I1O60431 355 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 GPC4O75487 556 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 SUN1O94901 812 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 AGXTP21549 392 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 OTX2P32243 289 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 CETN2P41208 172 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 RAB28P51157 221 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 FOXL2P58012 376 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 DCDP81605 110 aaKnown RBP9.92□□□□□ -0.82
VPS50-201ENST00000251739 RAPSNQ13702 412 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 OASLQ15646 514 aaKnown RBP9.92□□□□□ -0.82
VPS50-201ENST00000251739 PLEKHN1Q494U1 663 aaPredicted RBP9.92□□□□□ -0.82
VPS50-201ENST00000251739 NKAIN1Q4KMZ8 207 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 CCDC38Q502W7 563 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 C4orf17Q53FE4 359 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 C1orf189Q5VU69 101 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 TLDC1Q6P9B6 456 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 NAPRTQ6XQN6 538 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 TMEM139Q8IV31 216 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 SLC22A15Q8IZD6 547 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 GALNT16Q8N428 558 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 LINC01555Q8NAE3 123 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 ACRBPQ8NEB7 543 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 SNRNP40Q96DI7 357 aaKnown RBP9.92□□□□□ -0.82
VPS50-201ENST00000251739 C19orf60Q96EN9 201 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 MRFAP1L1Q96HT8 127 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 SGSM3Q96HU1 749 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 ZNF285Q96NJ3 590 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 TMEM121Q9BTD3 319 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 AP1M1Q9BXS5 423 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 SLC29A3Q9BZD2 475 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 ZNF552Q9H707 407 aaPredicted RBP9.92□□□□□ -0.82
VPS50-201ENST00000251739 SLAMF7Q9NQ25 335 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 P4HTMQ9NXG6 502 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 DHCR7Q9UBM7 475 aaKnown RBP9.92□□□□□ -0.82
VPS50-201ENST00000251739 G3BP2Q9UN86 482 aaKnown RBP9.92□□□□□ -0.82
VPS50-201ENST00000251739 B3GNT3Q9Y2A9 372 aa9.92□□□□□ -0.82
VPS50-201ENST00000251739 PTRH2Q9Y3E5 179 aaKnown RBP9.92□□□□□ -0.82
VPS50-201ENST00000251739 TEP1Q99973 2627 aaKnown RBP9.92□□□□□ -0.82
VPS50-201ENST00000251739 CPAMD8Q8IZJ3 1885 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 CROCCQ5TZA2 2017 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 CCDC78A2IDD5 438 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 GOLGA6L9A6NEM1 432 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 PSMD3O43242 534 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 KRT86O43790 486 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 CBX6O95503 412 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 DDAH2O95865 285 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 LDLRP01130 860 aa9.91□□□□□ -0.82
VPS50-201ENST00000251739 IGHEP01854 428 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms