RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 MYO1GB0I1T2 1018 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 SLC28A1O00337 649 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 TBX1O43435 398 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 NUAK1O60285 661 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 KCNK2O95069 426 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 S100BP04271 92 aaPredicted RBP15.15■□□□□ 0.02
DDX55-201ENST00000238146 PTGER3P43115 390 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 SEPHS1P49903 392 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 C10orf120Q5SQS8 335 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 LRIF1Q5T3J3 769 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 STEAP3Q658P3 488 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 AKAP14Q86UN6 197 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 CCDC71Q8IV32 467 aaPredicted RBP15.15■□□□□ 0.02
DDX55-201ENST00000238146 RGL4Q8IZJ4 473 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 CARNMT1Q8N4J0 409 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 EFHBQ8N7U6 833 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 SIGLEC11Q96RL6 698 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 CINPQ9BW66 212 aaPredicted RBP15.15■□□□□ 0.02
DDX55-201ENST00000238146 P2RY12Q9H244 342 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 ZNF408Q9H9D4 720 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 RASSF1Q9NS23 344 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.15■□□□□ 0.02
DDX55-201ENST00000238146 IFT52Q9Y366 437 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 ARIH1Q9Y4X5 557 aaPredicted RBP15.15■□□□□ 0.02
DDX55-201ENST00000238146 PABPN1LA6NDY0 278 aaKnown RBP15.15■□□□□ 0.02
DDX55-201ENST00000238146 RAD51BO15315 384 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 STX7O15400 261 aaKnown RBP15.15■□□□□ 0.02
DDX55-201ENST00000238146 ZNF623O75123 536 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 ULK1O75385 1050 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 RFPL2O75678 378 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 DIRAS1O95057 198 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 ZNF682O95780 498 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 B3GALT4O96024 378 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 IGLV3-27P01718 113 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 CR2P20023 1033 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 PURAQ00577 322 aaKnown RBP15.15■□□□□ 0.02
DDX55-201ENST00000238146 ZNF404Q494X3 552 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 USP39Q53GS9 565 aaKnown RBP15.15■□□□□ 0.02
DDX55-201ENST00000238146 COLEC12Q5KU26 742 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 ZNF551Q7Z340 670 aaPredicted RBP15.15■□□□□ 0.02
DDX55-201ENST00000238146 TRIM46Q7Z4K8 759 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 TSPYL5Q86VY4 417 aaPredicted RBP15.15■□□□□ 0.02
DDX55-201ENST00000238146 POC5Q8NA72 575 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 MS4A4AQ96JQ5 239 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 INPP5KQ9BT40 448 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 KCNH6Q9H252 994 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 MMP27Q9H306 513 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 RMI1Q9H9A7 625 aa15.15■□□□□ 0.02
DDX55-201ENST00000238146 ZBTB20Q9HC78 741 aaPredicted RBP15.15■□□□□ 0.02
DDX55-201ENST00000238146 ZNF490Q9ULM2 529 aaPredicted RBP15.15■□□□□ 0.02
DDX55-201ENST00000238146 SNPHO15079 494 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 MRPS14O60783 128 aaKnown RBP15.14■□□□□ 0.01
DDX55-201ENST00000238146 BCKDHAP12694 445 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 TACR2P21452 398 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 PTPN6P29350 595 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 ARHGDIAP52565 204 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 SYT16Q17RD7 645 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 LRIT3Q3SXY7 679 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 AHSA2Q719I0 299 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 ANKRD46Q86W74 232 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 POP5Q969H6 163 aaKnown RBP15.14■□□□□ 0.01
DDX55-201ENST00000238146 CCDC97Q96F63 343 aaPredicted RBP15.14■□□□□ 0.01
DDX55-201ENST00000238146 C8orf48Q96LL4 319 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 SPON2Q9BUD6 331 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 HOXD1Q9GZZ0 328 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 AP5M1Q9H0R1 490 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 EPS8L2Q9H6S3 715 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 TM9SF3Q9HD45 589 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 IL1RAPQ9NPH3 570 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 UGT2A1Q9Y4X1 527 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 CENPFP49454 3210 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 A0A096LPI6 279 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 CCL15-CCL14A0A0B4J2E2 113 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 METTL15A6NJ78 407 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 WBP4O75554 376 aaKnown RBP15.14■□□□□ 0.01
DDX55-201ENST00000238146 EFNA1P20827 205 aaPredicted RBP15.14■□□□□ 0.01
DDX55-201ENST00000238146 LIPAP38571 399 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 CLK1P49759 484 aaKnown RBP15.14■□□□□ 0.01
DDX55-201ENST00000238146 NKX2-5P52952 324 aaPredicted RBP15.14■□□□□ 0.01
DDX55-201ENST00000238146 IFITM2Q01629 132 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 CCL15Q16663 113 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 ZNF181Q2M3W8 571 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 C6orf183Q5T699 404 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 UBE2UQ5VVX9 321 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 SLC22A15Q8IZD6 547 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 TTC9BQ8N6N2 239 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 SLC38A4Q969I6 547 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 ASIC5Q9NY37 505 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 PDP1Q9P0J1 537 aaPredicted RBP15.14■□□□□ 0.01
DDX55-201ENST00000238146 UBA2Q9UBT2 640 aaPredicted RBP15.14■□□□□ 0.01
DDX55-201ENST00000238146 MAN2B2Q9Y2E5 1009 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 TESMINQ9Y4I5 508 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 ANGPTL3Q9Y5C1 460 aa15.14■□□□□ 0.01
DDX55-201ENST00000238146 AGAP5A6NIR3 686 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 ANKRD66B4E2M5 251 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 FAM47E-STBD1D6RA91 191 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 PSMD11O00231 422 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 TAF4O00268 1085 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 WNT9AO14904 365 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 GLUD1P00367 558 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms